RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 ZBTB25P24278 435 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 BRS3P32247 399 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 MNDAP41218 407 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 PLA2G7Q13093 441 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 MADCAM1Q13477 382 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 SSX2Q16385 188 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 LTC4SQ16873 150 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 LRRC75BQ2VPJ9 315 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 MORN2Q502X0 79 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 HACD4Q5VWC8 232 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 C16orf87Q6PH81 154 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 LIAT1Q6ZQX7 453 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 Q6ZS49 121 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 PRR18Q8N4B5 295 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 SAMD12Q8N8I0 201 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 OR4A4PQ8NGN8 299 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 AJUBAQ96IF1 538 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 SSX3Q99909 188 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 ESM1Q9NQ30 184 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 ABCB10Q9NRK6 738 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 TRAV18A0A075B6X5 111 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 LY6LH3BQJ8 138 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 ITGB1BP1O14713 200 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 XRCC3O43542 346 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 CRYBA1P05813 215 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 FCGR3AP08637 254 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 CTXN2P0C2S0 81 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 RAB7AP51149 207 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 GNG2P59768 71 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 HLA-DRB3P79483 266 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 ZNF260Q3ZCT1 412 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 OLFML2AQ68BL7 652 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 SLC25A48Q6ZT89 311 aaKnown RBP7.74□□□□□ -1.17
CCDC40-214ENST00000575431 LHFPL4Q7Z7J7 247 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 OR8H3Q8N146 312 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 OR10X1Q8NGY0 326 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 OR1L1Q8NH94 360 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 IL1F10Q8WWZ1 152 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 EDARADDQ8WWZ3 215 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 RPEQ96AT9 228 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 SLC25A38Q96DW6 304 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 RAB18Q9NP72 206 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 COMMD3Q9UBI1 195 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 PITPNC1Q9UKF7 332 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 VPREB3Q9UKI3 123 aa7.74□□□□□ -1.17
CCDC40-214ENST00000575431 FAM172BPA6NC97 362 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 RNF212BA8MTL3 300 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 H3BUX3 64 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 ZNF701M0R085 212 aaPredicted RBP7.73□□□□□ -1.17
CCDC40-214ENST00000575431 FABP7O15540 132 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 HSPA12AO43301 675 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 TXNL1O43396 289 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 TPPPO94811 219 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 IGHV4-59P01825 116 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 GAPDHP04406 335 aaKnown RBP7.73□□□□□ -1.17
CCDC40-214ENST00000575431 CBX5P45973 191 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 GNG10P50151 68 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 KRTAP24-1Q3LI83 254 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 TMEM69Q5SWH9 247 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 TPTE2P1Q5T6R2 138 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 BAIAP2L2Q6UXY1 529 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 ZNF439Q8NDP4 499 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 OR2AK2Q8NG84 335 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 C15orf40Q8WUR7 153 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 TOMM40LQ969M1 308 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 ISOC1Q96CN7 298 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 HDHD3Q9BSH5 251 aaPredicted RBP7.73□□□□□ -1.17
CCDC40-214ENST00000575431 CHIAQ9BZP6 476 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 AUNIPQ9H7T9 357 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 NDUFA13Q9P0J0 144 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 ADAM30Q9UKF2 790 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 HILPDAQ9Y5L2 63 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 C2CD3Q4AC94 2353 aa7.73□□□□□ -1.17
CCDC40-214ENST00000575431 IGHV3-43A0A0B4J1X8 118 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 TMEM235A6NFC5 223 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 CCDC160A6NGH7 325 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 H3BMQ9 156 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 SCTP09683 121 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 IGHV3-43DP0DP04 118 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 HKR1P10072 659 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 ZNF137PP52743 207 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 ZNF816Q0VGE8 651 aaPredicted RBP7.72□□□□□ -1.17
CCDC40-214ENST00000575431 FOXL1Q12952 345 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 CT45A1Q5HYN5 189 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 LDLRAD2Q5SZI1 272 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 Q6ZPA2 131 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 THNSL2Q86YJ6 484 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 DYNAPQ8N1N2 210 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 OR52L2PQ8NGH6 319 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 OR10J5Q8NHC4 309 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 CT45A3Q8NHU0 189 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 UBALD1Q8TB05 177 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 C17orf50Q8WW18 174 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 LEAP2Q969E1 77 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 ST6GALNAC6Q969X2 333 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 ABHD14AQ9BUJ0 271 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 C19orf24Q9BVV8 132 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 TOLLIPQ9H0E2 274 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 CCDC59Q9P031 241 aaKnown RBP7.72□□□□□ -1.17
CCDC40-214ENST00000575431 PIPOXQ9P0Z9 390 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms