RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 LMO1P25800 156 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 LINC00205P59089 165 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 UBE2KP61086 200 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 TMEM187Q14656 261 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 USF2Q15853 346 aaPredicted RBP7.31□□□□□ -1.24
RPAIN-215ENST00000575112 TBC1D26Q86UD7 250 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 HIST3H2BBQ8N257 126 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 TTTY12Q9BZ98 90 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 PLK3Q9H4B4 646 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 VSIRQ9H7M9 311 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 GNG13Q9P2W3 67 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 K7N7A8 449 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 TAAR5O14804 337 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 PHOX2AO14813 284 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 COL8A2P25067 703 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 P2RY1P47900 373 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 UBALD2Q8IYN6 164 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 OR5C1Q8NGR4 320 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 OR10J5Q8NHC4 309 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 PCED1AQ9H1Q7 454 aa7.31□□□□□ -1.24
RPAIN-215ENST00000575112 IGLV3-12A0A075B6K2 115 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 A0A087X0M5 115 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 A0A1B0GX30 115 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 SLC22A20A6NK97 555 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 PDCD6O75340 191 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 IFNA17P01571 189 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 FUT6P51993 359 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 TGFBR3Q03167 851 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 SSX7Q7RTT5 188 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 CCDC71LQ8N9Z2 235 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 SSC4DQ8WTU2 575 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 IER2Q9BTL4 223 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 RBFOX3A6NFN3 312 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 WNT9BO14905 357 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 TOX3O15405 576 aaPredicted RBP7.3□□□□□ -1.24
RPAIN-215ENST00000575112 SCAF4O95104 1147 aaKnown RBP7.3□□□□□ -1.24
RPAIN-215ENST00000575112 PPYP01298 95 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 GAPDHP04406 335 aaKnown RBP7.3□□□□□ -1.24
RPAIN-215ENST00000575112 TBPP20226 339 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 RAB5CP51148 216 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 EWSR1Q01844 656 aaKnown RBP eCLIP7.3□□□□□ -1.24
RPAIN-215ENST00000575112 SSPNQ14714 243 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 MPV17LQ2QL34 196 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 PRAMEF6Q5VXH4 476 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 ZNF429Q86V71 674 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 FAM89BQ8N5H3 189 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 ZNF709Q8N972 641 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 ZNF610Q8N9Z0 462 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 GINS3Q9BRX5 216 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 OPA3Q9H6K4 179 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 C9orf172C9J069 976 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 CHST1O43916 411 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 IGHMP01871 453 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 HIST1H1BP16401 226 aaKnown RBP7.3□□□□□ -1.24
RPAIN-215ENST00000575112 ZNF133P52736 654 aaPredicted RBP7.3□□□□□ -1.24
RPAIN-215ENST00000575112 UCP2P55851 309 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 ICAM4Q14773 271 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 ZNF385CQ66K41 422 aaPredicted RBP7.3□□□□□ -1.24
RPAIN-215ENST00000575112 LHFPL2Q6ZUX7 228 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 MDP1Q86V88 176 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 TGIF2LXQ8IUE1 241 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 TCEAL7Q9BRU2 100 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 ARV1Q9H2C2 271 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 NAA60Q9H7X0 242 aa7.3□□□□□ -1.24
RPAIN-215ENST00000575112 FOXD3Q9UJU5 478 aaPredicted RBP7.3□□□□□ -1.24
RPAIN-215ENST00000575112 A0A087WZY1 265 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 TRGV5A0A0B4J1U4 118 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 C3orf85A0A1B0GTC6 90 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 A0A1B0GUS0 222 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 SRP19P09132 144 aaKnown RBP7.29□□□□□ -1.24
RPAIN-215ENST00000575112 DEFA4P12838 97 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 CD33P20138 364 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 G0S2P27469 103 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 DDTP30046 118 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 RAB11AP62491 216 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 MRGPRDQ8TDS7 321 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 MSI2Q96DH6 328 aaKnown RBP7.29□□□□□ -1.24
RPAIN-215ENST00000575112 GALNT14Q96FL9 552 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 GUCD1Q96NT3 240 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 FAM173AQ9BQD7 235 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 PROK2Q9HC23 129 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 OR1A1Q9P1Q5 309 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 A0A1W2PNV4 684 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 KLRC4-KLRK1H3BQV0 150 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 SEC11BP0C7V7 166 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 CHATP28329 748 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 PMELP40967 661 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 RHEBQ15382 184 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 ZNF124Q15973 351 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 M1APQ8TC57 530 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 LEAP2Q969E1 77 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 CLDN23Q96B33 292 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 MALSU1Q96EH3 234 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 DCTN5Q9BTE1 182 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 GNG12Q9UBI6 72 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 IGHV3OR15-7A0A075B7D8 119 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 BTBD17A6NE02 478 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 E5RGE8 158 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 EREGO14944 169 aa7.29□□□□□ -1.24
RPAIN-215ENST00000575112 MMP7P09237 267 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms