RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 NHLH2Q02577 135 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 CXorf66Q5JRM2 361 aaPredicted RBP11.8□□□□□ -0.52
VPS33B-208ENST00000574755 KRBOX4Q5JUW0 171 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 STPG2Q8N412 459 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 Q8NA96 180 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 UBAC2Q8NBM4 344 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 CLEC18CQ8NCF0 446 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 OR1L1Q8NH94 360 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 NARS2Q96I59 477 aaKnown RBP11.8□□□□□ -0.52
VPS33B-208ENST00000574755 MAGT1Q9H0U3 335 aa11.8□□□□□ -0.52
VPS33B-208ENST00000574755 NXPH3O95157 252 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 ZNF16P17020 682 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-208ENST00000574755 NKX6-1P78426 367 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-208ENST00000574755 OR2C3Q8N628 320 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 TPRX1Q8N7U7 411 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 RNASE11Q8TAA1 199 aaKnown RBP11.79□□□□□ -0.52
VPS33B-208ENST00000574755 MRGPRDQ8TDS7 321 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 ARL11Q969Q4 196 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 OR2V2Q96R30 315 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 SH3BGRL2Q9UJC5 107 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 BORCS7-ASMTA0A0B4J1R7 106 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 MED6O75586 246 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 EPHA1P21709 976 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 TBR1Q16650 682 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 GFRALQ6UXV0 394 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 C22orf34Q6ZV56 151 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 SUN5Q8TC36 379 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 NINJ1Q92982 152 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 ABHD14BQ96IU4 210 aa11.79□□□□□ -0.52
VPS33B-208ENST00000574755 LIN7CQ9NUP9 197 aaKnown RBP11.79□□□□□ -0.52
VPS33B-208ENST00000574755 A0A0G2JNJ9 132 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 RAB19A4D1S5 217 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 K7ENP7 123 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 SPRY3O43610 288 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 HBZP02008 142 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 EGR1P18146 543 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 GLIPR1P48060 266 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 VAMP2P63027 116 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 EWSR1Q01844 656 aaKnown RBP eCLIP11.78□□□□□ -0.52
VPS33B-208ENST00000574755 DRAM1Q8N682 238 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 CD177Q8N6Q3 437 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 TMEM171Q8WVE6 324 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 SAT2Q96F10 170 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-208ENST00000574755 PLEKHF2Q9H8W4 249 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 COQ3Q9NZJ6 369 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 Q9UFV3 132 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 A0A0G2JRQ6 117 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 FAM24AA6NFZ4 105 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 SRRM5B3KS81 715 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 WRBO00258 174 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 WNT2P09544 360 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 PRDX2P32119 198 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 SULT1A2P50226 295 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 RPS23P62266 143 aaKnown RBP11.78□□□□□ -0.52
VPS33B-208ENST00000574755 ID3Q02535 119 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 PXDC1Q5TGL8 231 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 MRGPRGQ86SM5 289 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-208ENST00000574755 BPIFCQ8NFQ6 507 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 OR52L2PQ8NGH6 319 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 HRH4Q9H3N8 390 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 C11orf1Q9H5F2 150 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 WFDC1Q9HC57 220 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 CACNA1DQ01668 2161 aa11.78□□□□□ -0.52
VPS33B-208ENST00000574755 IGLV3-9A0A075B6K5 115 aa11.77□□□□□ -0.52
VPS33B-208ENST00000574755 APOC3P02656 99 aa11.77□□□□□ -0.52
VPS33B-208ENST00000574755 AKR1C2P52895 323 aa11.77□□□□□ -0.52
VPS33B-208ENST00000574755 AKR1C1Q04828 323 aa11.77□□□□□ -0.52
VPS33B-208ENST00000574755 EDDM3AQ14507 147 aa11.77□□□□□ -0.52
VPS33B-208ENST00000574755 MOGAT3Q86VF5 341 aa11.77□□□□□ -0.52
VPS33B-208ENST00000574755 OR10Z1Q8NGY1 313 aa11.77□□□□□ -0.52
VPS33B-208ENST00000574755 MEGF10Q96KG7 1140 aa11.77□□□□□ -0.52
VPS33B-208ENST00000574755 OR2D2Q9H210 308 aa11.77□□□□□ -0.52
VPS33B-208ENST00000574755 ESRP2Q9H6T0 727 aaKnown RBP11.77□□□□□ -0.52
VPS33B-208ENST00000574755 MMP26Q9NRE1 261 aa11.77□□□□□ -0.52
VPS33B-208ENST00000574755 LYRM2Q9NU23 88 aaPredicted RBP11.77□□□□□ -0.52
VPS33B-208ENST00000574755 NBEAQ8NFP9 2946 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 MEX3AA1L020 520 aaKnown RBP11.77□□□□□ -0.53
VPS33B-208ENST00000574755 CD40P25942 277 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 CCKARP32238 428 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 SSTR5P35346 364 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 ASCL1P50553 236 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 SELENOVP59797 346 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 SPRNQ5BIV9 151 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 GCSAMQ8N6F7 178 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 ZNF645Q8N7E2 425 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 OR13A1Q8NGR1 328 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 GPR146Q96CH1 333 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 RNF150Q9ULK6 438 aa11.77□□□□□ -0.53
VPS33B-208ENST00000574755 A0A1B0GU03 582 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 IGSF23A1L1A6 192 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 IGKV1-39P01597 117 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 IGKV1D-39P04432 117 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 M6PRP20645 277 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 OMGP23515 440 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 LPAR6P43657 344 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 MST1LQ2TV78 715 aa11.76□□□□□ -0.53
VPS33B-208ENST00000574755 FAM53AQ6NSI3 398 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms