RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 SPINT2O43291 252 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 LANCL1O43813 399 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 MYF6P23409 242 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 DCKP27707 260 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 GNMTQ14749 295 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 TMEM30BQ3MIR4 351 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 DMKNQ6E0U4 476 aaPredicted RBP17.1■□□□□ 0.33
SNF8-216ENST00000573795 RAB12Q6IQ22 244 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 PRR18Q8N4B5 295 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 GHSRQ92847 366 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 RITA1Q96K30 269 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 PGLYRP3Q96LB9 341 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 BABAM2Q9NXR7 383 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 CLEC2DQ9UHP7 191 aa17.1■□□□□ 0.33
SNF8-216ENST00000573795 ZNF256Q9Y2P7 627 aaPredicted RBP17.1■□□□□ 0.33
SNF8-216ENST00000573795 SORL1Q92673 2214 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 MCRIP1C9JLW8 97 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 G3V318 75 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 SC5DO75845 299 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 FSTP19883 344 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 CNTFRP26992 372 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 MMDQ15546 238 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 C6orf183Q5T699 404 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 GLIPR1L1Q6UWM5 242 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 TMPRSS11AQ6ZMR5 421 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 LYPD6Q86Y78 171 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 ODF3L1Q8IXM7 274 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 ZNF491Q8N8L2 437 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 ZNF485Q8NCK3 441 aa17.09■□□□□ 0.33
SNF8-216ENST00000573795 MRPS28Q9Y2Q9 187 aaKnown RBP17.09■□□□□ 0.33
SNF8-216ENST00000573795 LYSTQ99698 3801 aa17.08■□□□□ 0.33
SNF8-216ENST00000573795 STARD9Q9P2P6 4700 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 TRBV5-7A0A0A0MS05 114 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 IGLV1-40P01703 118 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 OR5H8P0DN80 308 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 CHATP28329 748 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 GNB1P62873 340 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 RUNX1Q01196 453 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 GPR176Q14439 515 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 Q499Y3 187 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 MORN2Q502X0 79 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 STEAP3Q658P3 488 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 SIGIRRQ6IA17 410 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 ZFP41Q8N8Y5 198 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 MRPS24Q96EL2 167 aaKnown RBP17.08■□□□□ 0.32
SNF8-216ENST00000573795 UBE2E2Q96LR5 201 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 RDH12Q96NR8 316 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 BANF2Q9H503 90 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 MBNL3Q9NUK0 354 aaKnown RBP17.08■□□□□ 0.32
SNF8-216ENST00000573795 DIMT1Q9UNQ2 313 aaKnown RBP17.08■□□□□ 0.32
SNF8-216ENST00000573795 PEX16Q9Y5Y5 336 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 WSB1Q9Y6I7 421 aa17.08■□□□□ 0.32
SNF8-216ENST00000573795 ATP6V0E1O15342 81 aa17.07■□□□□ 0.32
SNF8-216ENST00000573795 CHCHD6Q9BRQ6 235 aa17.07■□□□□ 0.32
SNF8-216ENST00000573795 MRPL20Q9BYC9 149 aaKnown RBP17.07■□□□□ 0.32
SNF8-216ENST00000573795 TAF9BQ9HBM6 251 aa17.07■□□□□ 0.32
SNF8-216ENST00000573795 RAB9BQ9NP90 201 aa17.07■□□□□ 0.32
SNF8-216ENST00000573795 IGHV7-81A0A0B4J1V7 117 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 A0A1W2PPK0 400 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 FAM90A10PA6NDY2 464 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 HLA-DRB1P01911 266 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 ACTBP60709 375 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 YIF1BQ5BJH7 314 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 TRAT1Q6PIZ9 186 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 PQLC1Q8N2U9 271 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 JAGN1Q8N5M9 183 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 OR52L2PQ8NGH6 319 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 OR1N2Q8NGR9 330 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 Q96M66 194 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 OR5B12Q96R08 314 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 OR14A2Q96R54 314 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 NABP2Q9BQ15 211 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 ABHD14AQ9BUJ0 271 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 OR51J1Q9H342 316 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 S100A14Q9HCY8 104 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 OR2S2Q9NQN1 319 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 VSIG4Q9Y279 399 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 EXOSC1Q9Y3B2 195 aaKnown RBP17.06■□□□□ 0.32
SNF8-216ENST00000573795 DNAH1Q9P2D7 4330 aa17.06■□□□□ 0.32
SNF8-216ENST00000573795 FAM90A7PA6NKC0 464 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 FAM90A23PA8MXZ1 464 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 C3orf84H3BNL1 204 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 CA11O75493 328 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 OR8U8P0C7N1 319 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 MGMTP16455 207 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 PPP1CCP36873 323 aaKnown RBP17.05■□□□□ 0.32
SNF8-216ENST00000573795 ZNF616Q08AN1 781 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 DOC2BQ14184 412 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 AWAT2Q6E213 333 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 MRPL30Q8TCC3 161 aaKnown RBP17.05■□□□□ 0.32
SNF8-216ENST00000573795 ANKRD60Q9BZ19 345 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 SELENOIQ9C0D9 397 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 PARP11Q9NR21 331 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 CKLFQ9UBR5 152 aa17.05■□□□□ 0.32
SNF8-216ENST00000573795 EPPK1P58107 5090 aaKnown RBP17.05■□□□□ 0.32
SNF8-216ENST00000573795 UBE2QL1A1L167 161 aa17.04■□□□□ 0.32
SNF8-216ENST00000573795 BLVRBP30043 206 aaPredicted RBP17.04■□□□□ 0.32
SNF8-216ENST00000573795 INSL3P51460 131 aa17.04■□□□□ 0.32
SNF8-216ENST00000573795 NDPQ00604 133 aa17.04■□□□□ 0.32
SNF8-216ENST00000573795 C19orf54Q5BKX5 351 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms