RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 KMT2CQ8NEZ4 4911 aaKnown RBP12.75□□□□□ -0.37
CHD3-215ENST00000572750 OR52M1Q8NGK5 317 aa12.75□□□□□ -0.37
CHD3-215ENST00000572750 OR10X1Q8NGY0 326 aa12.75□□□□□ -0.37
CHD3-215ENST00000572750 CMSS1Q9BQ75 279 aaKnown RBP12.75□□□□□ -0.37
CHD3-215ENST00000572750 RAB9BQ9NP90 201 aa12.75□□□□□ -0.37
CHD3-215ENST00000572750 DPM3Q9P2X0 92 aa12.75□□□□□ -0.37
CHD3-215ENST00000572750 AMMECR1Q9Y4X0 333 aaPredicted RBP12.75□□□□□ -0.37
CHD3-215ENST00000572750 CMYA5Q8N3K9 4069 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 TRBV6-6A0A0A6YYG2 114 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 VGLL3A8MV65 326 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 LEUTXA8MZ59 168 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 SLC31A2O15432 143 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 CD3GP09693 182 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 SCAND1P57086 179 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 HLA-DRB3P79483 266 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 AANATQ16613 207 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 TMEM30BQ3MIR4 351 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 PDLIM3Q53GG5 364 aaPredicted RBP12.74□□□□□ -0.37
CHD3-215ENST00000572750 OR52L2PQ8NGH6 319 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 PIFOQ8TCI5 191 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 IL1F10Q8WWZ1 152 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 GCDHQ92947 438 aaPredicted RBP12.74□□□□□ -0.37
CHD3-215ENST00000572750 SLC25A46Q96AG3 418 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 RIMS4Q9H426 269 aaPredicted RBP12.74□□□□□ -0.37
CHD3-215ENST00000572750 OR2S2Q9NQN1 319 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 ABCB10Q9NRK6 738 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 ABRACLQ9P1F3 81 aa12.74□□□□□ -0.37
CHD3-215ENST00000572750 ELF5Q9UKW6 265 aaPredicted RBP12.74□□□□□ -0.37
CHD3-215ENST00000572750 LY6LH3BQJ8 138 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 CHST1O43916 411 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 FCGR3AP08637 254 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 PPP1CCP36873 323 aaKnown RBP12.73□□□□□ -0.37
CHD3-215ENST00000572750 CEACAM3P40198 252 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 MRPS15P82914 257 aaKnown RBP12.73□□□□□ -0.37
CHD3-215ENST00000572750 MADCAM1Q13477 382 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 DIAPH2-AS1Q14236 149 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 CROCCP3Q8IVE0 287 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 ZNF439Q8NDP4 499 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 MAFIPQ8WZ33 124 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 TOMM40LQ969M1 308 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 GALMQ96C23 342 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 Q9N2K0 584 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 JPT1Q9UK76 154 aa12.73□□□□□ -0.37
CHD3-215ENST00000572750 TMEM235A6NFC5 223 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 SERPINE3A8MV23 424 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 HKR1P10072 659 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 CD24P25063 80 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 RELBQ01201 579 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 ARFRP1Q13795 201 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 FBLN7Q53RD9 439 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 DHRS7BQ6IAN0 325 aaPredicted RBP12.72□□□□□ -0.37
CHD3-215ENST00000572750 TMEM219Q86XT9 240 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 CLVS1Q8IUQ0 354 aaPredicted RBP12.72□□□□□ -0.37
CHD3-215ENST00000572750 RPEQ96AT9 228 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 CREB3L1Q96BA8 519 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 DCSTAMPQ9H295 470 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 C1RLQ9NZP8 487 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 ZNF230Q9UIE0 474 aaPredicted RBP12.72□□□□□ -0.37
CHD3-215ENST00000572750 SPATA2Q9UM82 520 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 TCF19Q9Y242 345 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 RYR3Q15413 4870 aa12.72□□□□□ -0.37
CHD3-215ENST00000572750 TMEM89A2RUT3 159 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 HSD17B6O14756 317 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 SCGNO76038 276 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 CRYBA1P05813 215 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 REG1BP48304 166 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 ZNF134P52741 427 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 HTD2P86397 168 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 CDNFQ49AH0 187 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 UBE2NLQ5JXB2 153 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 SLC25A48Q6ZT89 311 aaKnown RBP12.71□□□□□ -0.37
CHD3-215ENST00000572750 IZUMO1Q8IYV9 350 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 SAMD12Q8N8I0 201 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 C8orf31Q8N9H6 132 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 NUDCD2Q8WVJ2 157 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 ABHD14AQ9BUJ0 271 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 OR1A1Q9P1Q5 309 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 SLC23A1Q9UHI7 598 aa12.71□□□□□ -0.37
CHD3-215ENST00000572750 A0A1W2PPI3 338 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 TIMM23O14925 209 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 TMEM127O75204 238 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 SCTP09683 121 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 RPL5P46777 297 aaKnown RBP12.7□□□□□ -0.38
CHD3-215ENST00000572750 DYNLT3P51808 116 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 ARHGDIBP52566 201 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 RAG2P55895 527 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 Q3ZCU0 254 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 MORN2Q502X0 79 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 AWAT1Q58HT5 328 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 CT45A1Q5HYN5 189 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 STEAP3Q658P3 488 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 CCDC144NLQ6NUI1 221 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 CCBE1Q6UXH8 406 aaPredicted RBP12.7□□□□□ -0.38
CHD3-215ENST00000572750 LINC00311Q8N616 119 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 OR56B4Q8NH76 319 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 CT45A3Q8NHU0 189 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 PHF21AQ96BD5 680 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 OCSTAMPQ9BR26 566 aa12.7□□□□□ -0.38
CHD3-215ENST00000572750 PARP12Q9H0J9 701 aaKnown RBP12.7□□□□□ -0.38
CHD3-215ENST00000572750 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms