RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 DAPK2Q9UIK4 370 aa11.25□□□□□ -0.61
RPAIN-211ENST00000572174 RNF114Q9Y508 228 aa11.25□□□□□ -0.61
RPAIN-211ENST00000572174 A0A0A6YYD4 124 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 SHISA3A0PJX4 238 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 A6NDX4 124 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 LY6LH3BQJ8 138 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 HSD17B6O14756 317 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 SOCS1O15524 211 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 MDKP21741 143 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-211ENST00000572174 KIR2DS4P43632 304 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 ZNF816Q0VGE8 651 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-211ENST00000572174 KIR2DS1Q14954 304 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 BAIAP2L2Q6UXY1 529 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 THNSL2Q86YJ6 484 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 DYNAPQ8N1N2 210 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 SETD6Q8TBK2 473 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 ARHGAP5-AS1Q96IT6 56 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 PECRQ9BY49 303 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 GHITMQ9H3K2 345 aa11.24□□□□□ -0.61
RPAIN-211ENST00000572174 FOXI3A8MTJ6 420 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-211ENST00000572174 YPEL1O60688 119 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 DIRAS3O95661 229 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 HIST1H1DP16402 221 aaKnown RBP11.23□□□□□ -0.61
RPAIN-211ENST00000572174 ZNF137PP52743 207 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 PITPNAQ00169 270 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 MXD1Q05195 221 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 LDLRAD2Q5SZI1 272 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 ZNF880Q6PDB4 577 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 Q6ZSV7 163 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 SLC25A48Q6ZT89 311 aaKnown RBP11.23□□□□□ -0.61
RPAIN-211ENST00000572174 OR1L1Q8NH94 360 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 SGMS2Q8NHU3 365 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 EDARADDQ8WWZ3 215 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 YPEL2Q96QA6 119 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 ABHD14AQ9BUJ0 271 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 MRPS26Q9BYN8 205 aaKnown RBP11.23□□□□□ -0.61
RPAIN-211ENST00000572174 PRSS22Q9GZN4 317 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 ATG5Q9H1Y0 275 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPAIN-211ENST00000572174 AK3Q9UIJ7 227 aa11.23□□□□□ -0.61
RPAIN-211ENST00000572174 A0A0A6YYH2 397 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 IGHV3-43A0A0B4J1X8 118 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 A6NJ64 397 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 HSPA12AO43301 675 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 IGHV3-43DP0DP04 118 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 ZBTB25P24278 435 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 TALDO1P37837 337 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 SERPINB10P48595 397 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 HLA-DRB3P79483 266 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 RELBQ01201 579 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 ARFRP1Q13795 201 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 MORN2Q502X0 79 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 ARSJQ5FYB0 599 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-211ENST00000572174 TET2Q6N021 2002 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-211ENST00000572174 NR2C2APQ86WQ0 139 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 OR2AK2Q8NG84 335 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 LINC01006Q8NI28 216 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 WFDC12Q8WWY7 111 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 IL1F10Q8WWZ1 152 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 LEAP2Q969E1 77 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 YIPF6Q96EC8 236 aa11.22□□□□□ -0.61
RPAIN-211ENST00000572174 RAB27BO00194 218 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 MFNGO00587 321 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 ITGB1BP1O14713 200 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 PEX14O75381 377 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 OR2F2O95006 317 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 IGHV3-7P01780 117 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 GSTP1P09211 210 aaKnown RBP11.21□□□□□ -0.61
RPAIN-211ENST00000572174 SLC2A2P11168 524 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-211ENST00000572174 TMEM50BP56557 158 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 SRSF7Q16629 238 aaKnown RBP eCLIP11.21□□□□□ -0.61
RPAIN-211ENST00000572174 IDNKQ5T6J7 187 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 TGIF2LXQ8IUE1 241 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 ZNF439Q8NDP4 499 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 OR10V1Q8NGI7 309 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 OR4A4PQ8NGN8 299 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 LGALS14Q8TCE9 139 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 RBM14Q96PK6 669 aaKnown RBP11.21□□□□□ -0.61
RPAIN-211ENST00000572174 SLC25A33Q9BSK2 321 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 Q9N2K0 584 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 RHBDL2Q9NX52 303 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 PIPOXQ9P0Z9 390 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 MOB4Q9Y3A3 225 aa11.21□□□□□ -0.61
RPAIN-211ENST00000572174 IGHV1-3A0A0C4DH29 117 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 A0A1W2PPI3 338 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 SMIM30A4D0T7 59 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 TIMM23O14925 209 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 LANCL1O43813 399 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 CHST1O43916 411 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 PAX6P26367 422 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 RAB13P51153 203 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 HES1Q14469 280 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 HABP2Q14520 560 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-211ENST00000572174 PLAC9Q5JTB6 97 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 TMEM219Q86XT9 240 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 IZUMO1Q8IYV9 350 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 LYG1Q8N1E2 194 aa11.2□□□□□ -0.62
RPAIN-211ENST00000572174 Q8N2B8 174 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms