RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 CST11Q9H112 138 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 TAF9BQ9HBM6 251 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 MBNL3Q9NUK0 354 aaKnown RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 GHRLQ9UBU3 117 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 AK6Q9Y3D8 172 aaKnown RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 PRKDCP78527 4128 aaKnown RBP4.28□□□□□ -1.72
CHD3-212ENST00000570758 DNAH3Q8TD57 4116 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 TCRBV4S1A1TA0A5B7 111 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 SHISA3A0PJX4 238 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 PSMB11A5LHX3 300 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 LINC01548A6NM66 108 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 M0QZK8 103 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 SLC17A2O00624 439 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 SOCS1O15524 211 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 SPINT2O43291 252 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 FGF16O43320 207 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 PEX14O75381 377 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 CA11O75493 328 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 ATP6V1G2O95670 118 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 BPNT1O95861 308 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 PRB2P02812 416 aaPredicted RBP4.28□□□□□ -1.72
CHD3-212ENST00000570758 BLVRBP30043 206 aaPredicted RBP4.28□□□□□ -1.72
CHD3-212ENST00000570758 PPP1CCP36873 323 aaKnown RBP4.28□□□□□ -1.72
CHD3-212ENST00000570758 HSPA13P48723 471 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 ZNF137PP52743 207 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 CLDN12P56749 244 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 EMX1Q04741 257 aaPredicted RBP4.28□□□□□ -1.72
CHD3-212ENST00000570758 MLLT11Q13015 90 aaPredicted RBP4.28□□□□□ -1.72
CHD3-212ENST00000570758 PLA2G7Q13093 441 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 RAB11BQ15907 218 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 SSX1Q16384 188 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 TMEM30BQ3MIR4 351 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 MORN2Q502X0 79 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 KPRPQ5T749 579 aaPredicted RBP4.28□□□□□ -1.72
CHD3-212ENST00000570758 ZNF880Q6PDB4 577 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 TRAT1Q6PIZ9 186 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 PRSS48Q7RTY5 328 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 ZNF329Q86UD4 541 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 ODF3L1Q8IXM7 274 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 IZUMO1Q8IYV9 350 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 Q8N6K4 173 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 Q8N9W7 124 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 OR6M1Q8NGM8 313 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 R3HDM4Q96D70 268 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 NOL4LQ96MY1 436 aaPredicted RBP4.28□□□□□ -1.72
CHD3-212ENST00000570758 NEDD4LQ96PU5 975 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 MGLLQ99685 303 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 HDHD3Q9BSH5 251 aaPredicted RBP4.28□□□□□ -1.72
CHD3-212ENST00000570758 TMEM59Q9BXS4 323 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 LPAR5Q9H1C0 372 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 VCX3BQ9H321 246 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 PLSCR3Q9NRY6 295 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 KCNIP1Q9NZI2 227 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 GNG12Q9UBI6 72 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 LINC00527Q9UJ94 153 aa4.28□□□□□ -1.72
CHD3-212ENST00000570758 NCBP2LA6PVI3 153 aaKnown RBP4.27□□□□□ -1.73
CHD3-212ENST00000570758 FOXI3A8MTJ6 420 aaPredicted RBP4.27□□□□□ -1.73
CHD3-212ENST00000570758 LANCL1O43813 399 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 YPEL1O60688 119 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 NAPSAO96009 420 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 MOSP00540 346 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 IGHG2P01859 326 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 ARSBP15848 533 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 IL3RAP26951 378 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 CALRP27797 417 aaKnown RBP4.27□□□□□ -1.73
CHD3-212ENST00000570758 CD1BP29016 333 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 TMEM50BP56557 158 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 OR10A3P58181 314 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 HTD2P86397 168 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 TRAM1Q15629 374 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 HMGN3Q15651 99 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 TBCEQ15813 527 aaPredicted RBP4.27□□□□□ -1.73
CHD3-212ENST00000570758 Q3ZCU0 254 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 OXLD1Q5BKU9 147 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 HES5Q5TA89 166 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 C18orf65Q6ZTR6 163 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 ZNF367Q7RTV3 350 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 OR2W3Q7Z3T1 314 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 SLC35E3Q7Z769 313 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 TGIF2LXQ8IUE1 241 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 SVOPQ8N4V2 548 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 FAM89BQ8N5H3 189 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 OR4F17Q8NGA8 305 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 OR51D1Q8NGF3 324 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 OR4X2Q8NGF9 303 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 OR2T10Q8NGZ9 312 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 KCNG3Q8TAE7 436 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 SETD6Q8TBK2 473 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 YPEL2Q96QA6 119 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 OR4F4Q96R69 305 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 HSPB9Q9BQS6 159 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 ABHD14AQ9BUJ0 271 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 MRPL20Q9BYC9 149 aaKnown RBP4.27□□□□□ -1.73
CHD3-212ENST00000570758 PARP12Q9H0J9 701 aaKnown RBP4.27□□□□□ -1.73
CHD3-212ENST00000570758 PLGRKTQ9HBL7 147 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 CHMP1AQ9HD42 196 aaPredicted RBP4.27□□□□□ -1.73
CHD3-212ENST00000570758 RAB9BQ9NP90 201 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 ACOT13Q9NPJ3 140 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 OR2S2Q9NQN1 319 aa4.27□□□□□ -1.73
CHD3-212ENST00000570758 AK3Q9UIJ7 227 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms