RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 GGNQ86UU5 652 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 CCDC54Q8NEL0 328 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 CT55Q8WUE5 264 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 OR2W1Q9Y3N9 320 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 IFNA1P01562 189 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 FGF5P12034 268 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 RAC2P15153 192 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 EGR1P18146 543 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 C6orf15Q6UXA7 325 aaPredicted RBP13.09□□□□□ -0.31
USP43-202ENST00000570475 MEGF10Q96KG7 1140 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 CDH20Q9HBT6 801 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 PKDREJQ9NTG1 2253 aa13.09□□□□□ -0.31
USP43-202ENST00000570475 K7ESF4 209 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 TRGC1P0CF51 173 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 G6PCP35575 357 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 UBE2NP61088 152 aaKnown RBP13.08□□□□□ -0.32
USP43-202ENST00000570475 EIF3IQ13347 325 aaKnown RBP13.08□□□□□ -0.32
USP43-202ENST00000570475 CLN8Q9UBY8 286 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 PRSS50Q9UI38 385 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 LY6G6EA0A0G2JKS1 128 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 CLDN34H7C241 214 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 ZNF737O75373 536 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 FAM53AQ6NSI3 398 aaPredicted RBP13.08□□□□□ -0.32
USP43-202ENST00000570475 SPSB3Q6PJ21 355 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 HEPN1Q6WQI6 88 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 Q6ZRM9 215 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 ZNF573Q86YE8 665 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 SIGLEC12Q96PQ1 595 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 TMEM204Q9BSN7 226 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 ATP23Q9Y6H3 246 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 U3KQA8 63 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 IGLV3-1P01715 115 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 CD55P08174 381 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 CTXN2P0C2S0 81 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 CHRNA7P36544 502 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 GNG3P63215 75 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 IL24Q13007 206 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 RTP5Q14D33 572 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 PYY3Q5JQD4 70 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 MUCL1Q96DR8 90 aa13.08□□□□□ -0.32
USP43-202ENST00000570475 IGKV1-6A0A0C4DH72 117 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 H7BYZ3 331 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 TGFBR3Q03167 851 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 Q0VFX4 171 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 OR1C1Q15619 314 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 CEACAM21Q3KPI0 293 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 NCR3LG1Q68D85 454 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 TMPRSS7Q7RTY8 843 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 OR4C12Q96R67 309 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 SSX3Q99909 188 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 LYZL6O75951 148 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 OR3A1P47881 315 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 SLC38A11Q08AI6 406 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 ELOBQ15370 118 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 ALKBH6Q3KRA9 238 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 ZNF826PQ6ZT77 177 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 PPP1R32Q7Z5V6 425 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 RNF122Q9H9V4 155 aa13.07□□□□□ -0.32
USP43-202ENST00000570475 FABP6P51161 128 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 UCP3P55916 312 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST1H3AP68431 136 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 GAMTQ14353 236 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 TMEM164Q5U3C3 297 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 ZNF66Q6ZN08 573 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 RBKSQ9H477 322 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 DLL3Q9NYJ7 618 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 BTBD17A6NE02 478 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 KIAA1324LA8MWY0 1029 aaPredicted RBP13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST1H2BKO60814 126 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 CRYAAP02489 173 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST1H2BJP06899 126 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 FOLR2P14207 255 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST1H2BOP23527 126 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST1H2BBP33778 126 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST1H2BDP58876 126 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST1H2BCP62807 126 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST2H2BEQ16778 126 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.06□□□□□ -0.32
USP43-202ENST00000570475 NUFIP2Q7Z417 695 aaKnown RBP13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST1H2BHQ93079 126 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST1H2BNQ99877 126 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HIST1H2BMQ99879 126 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 ZNF391Q9UJN7 358 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 COL6A3P12111 3177 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 LINC00205P59089 165 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 OR8B8Q15620 311 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 CLDND2Q8NHS1 167 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 OR2D2Q9H210 308 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 HEATR1Q9H583 2144 aaKnown RBP13.06□□□□□ -0.32
USP43-202ENST00000570475 CPAMD8Q8IZJ3 1885 aa13.06□□□□□ -0.32
USP43-202ENST00000570475 ZNF503-AS2A6NEH8 195 aa13.05□□□□□ -0.32
USP43-202ENST00000570475 LRRC3CA6NJW4 275 aa13.05□□□□□ -0.32
USP43-202ENST00000570475 PMELP40967 661 aa13.05□□□□□ -0.32
USP43-202ENST00000570475 STARD6P59095 220 aa13.05□□□□□ -0.32
USP43-202ENST00000570475 TMEM105Q8N8V8 129 aa13.05□□□□□ -0.32
USP43-202ENST00000570475 LRTM2Q8N967 370 aa13.05□□□□□ -0.32
USP43-202ENST00000570475 OR2J1Q9GZK6 312 aa13.05□□□□□ -0.32
USP43-202ENST00000570475 TINAGQ9UJW2 476 aa13.05□□□□□ -0.32
USP43-202ENST00000570475 BCL2P10415 239 aa13.05□□□□□ -0.32
USP43-202ENST00000570475 CDX1P47902 265 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms