RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 TMEM9BQ9NQ34 198 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 RIF1Q5UIP0 2472 aaKnown RBP7.46□□□□□ -1.21
LINC00558-201ENST00000569422 SPAARA0A1B0GVQ0 90 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 DEGS1O15121 323 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 FBP1P09467 338 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 CD1BP29016 333 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 SULT1A2P50226 295 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 RNPS1Q15287 305 aaKnown RBP7.46□□□□□ -1.22
LINC00558-201ENST00000569422 FBXW9Q5XUX1 488 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 FAM185AQ8N0U4 392 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 FAM58AQ8N1B3 248 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 C2CD4CQ8TF44 421 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 SMIM8Q96KF7 97 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 TECTBQ96PL2 329 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 RSRP1Q9BUV0 290 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 PLEKHA2Q9HB19 425 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 OR1A1Q9P1Q5 309 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 MLXQ9UH92 298 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 KCNS2Q9ULS6 477 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 PPP1R3CQ9UQK1 317 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 FBXO7Q9Y3I1 522 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 DMXL1Q9Y485 3027 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 CDRT15L2A8MXV6 281 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 PROB1E7EW31 1015 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 H0Y8G0 127 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 GPR137BO60478 399 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 UBE2NP61088 152 aaKnown RBP7.46□□□□□ -1.22
LINC00558-201ENST00000569422 TRIP6Q15654 476 aaKnown RBP7.46□□□□□ -1.22
LINC00558-201ENST00000569422 PRSS57Q6UWY2 283 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 TMEM108Q6UXF1 575 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 ZFP62Q8NB50 900 aaPredicted RBP7.46□□□□□ -1.22
LINC00558-201ENST00000569422 DMBX1Q8NFW5 382 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 OR5A2Q8NGI9 324 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 OR1K1Q8NGR3 316 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 OR5P3Q8WZ94 311 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 WDYHV1Q96HA8 205 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 ABHD14AQ9BUJ0 271 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 TMEM222Q9H0R3 208 aa7.46□□□□□ -1.22
LINC00558-201ENST00000569422 GSX1Q9H4S2 264 aaPredicted RBP7.46□□□□□ -1.22
LINC00558-201ENST00000569422 TRAV24A0A0B4J272 114 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 TRDCB7Z8K6 153 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 H7C2Y5 167 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 DAOP14920 347 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 F2RL1P55085 397 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 GNG3P63215 75 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 EWSR1Q01844 656 aaKnown RBP eCLIP7.45□□□□□ -1.22
LINC00558-201ENST00000569422 IL34Q6ZMJ4 242 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 CMTM1Q8IZ96 169 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 DEFB124Q8NES8 71 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 TMEM160Q9NX00 188 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 TRAPPC2LQ9UL33 140 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 TMED3Q9Y3Q3 217 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 ZNF724A8MTY0 619 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 H0YL77 283 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 M0R036 132 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 WDR1O75083 606 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 ZNF573Q86YE8 665 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 MDS2Q8NDY4 140 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 C1orf162Q8NEQ5 155 aaPredicted RBP7.45□□□□□ -1.22
LINC00558-201ENST00000569422 SAT2Q96F10 170 aaPredicted RBP7.45□□□□□ -1.22
LINC00558-201ENST00000569422 DLL3Q9NYJ7 618 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 RCC2Q9P258 522 aaKnown RBP7.45□□□□□ -1.22
LINC00558-201ENST00000569422 PURGQ9UJV8 347 aaKnown RBP7.45□□□□□ -1.22
LINC00558-201ENST00000569422 RNF150Q9ULK6 438 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 KIAA2026Q5HYC2 2103 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 KIAA1549Q9HCM3 1950 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 IGSF23A1L1A6 192 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 NAPSAO96009 420 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 OR13C7P0DN81 318 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 RUNX1Q01196 453 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 NRN1LQ496H8 165 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 OR2B11Q5JQS5 317 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 PLA2G2CQ5R387 149 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 FAM53AQ6NSI3 398 aaPredicted RBP7.45□□□□□ -1.22
LINC00558-201ENST00000569422 BTNL8Q6UX41 500 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 ZNF826PQ6ZT77 177 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 OR5C1Q8NGR4 320 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 MRPL30Q8TCC3 161 aaKnown RBP7.45□□□□□ -1.22
LINC00558-201ENST00000569422 CDH20Q9HBT6 801 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 OBP2BQ9NPH6 170 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 RPS10P5Q9NQ39 176 aa7.45□□□□□ -1.22
LINC00558-201ENST00000569422 KIR2DS1A0A191URI9 304 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 CHST1O43916 411 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 EIF3GO75821 320 aaKnown RBP eCLIP7.44□□□□□ -1.22
LINC00558-201ENST00000569422 SERPINE2P07093 398 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 PSG2P11465 335 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 PPP1CCP36873 323 aaKnown RBP7.44□□□□□ -1.22
LINC00558-201ENST00000569422 KIR2DS4P43632 304 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 ZNF154Q13106 437 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 PMS2P11Q13670 270 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 KIR2DS1Q14954 304 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 TBC1D28Q2M2D7 210 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 VHLLQ6RSH7 139 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 FDCSPQ8NFU4 85 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 OR1J1Q8NGS3 322 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 OR2G3Q8NGZ4 309 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 CACNA1DQ01668 2161 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 A0A0G2JRQ6 117 aa7.44□□□□□ -1.22
LINC00558-201ENST00000569422 PGLYRP1O75594 196 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms