RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 TMEM11P17152 192 aa23.34■■□□□ 1.33
RAB40C-211ENST00000568586 IL3RAP26951 378 aa23.34■■□□□ 1.33
RAB40C-211ENST00000568586 FABP5Q01469 135 aa23.34■■□□□ 1.33
RAB40C-211ENST00000568586 LY6G6FQ5SQ64 297 aa23.34■■□□□ 1.33
RAB40C-211ENST00000568586 Q8N6K4 173 aa23.34■■□□□ 1.33
RAB40C-211ENST00000568586 C5orf56Q8N8D9 126 aa23.34■■□□□ 1.33
RAB40C-211ENST00000568586 RTN4IP1Q8WWV3 396 aaPredicted RBP23.34■■□□□ 1.33
RAB40C-211ENST00000568586 ACOT13Q9NPJ3 140 aa23.34■■□□□ 1.33
RAB40C-211ENST00000568586 LRRC42Q9Y546 428 aa23.34■■□□□ 1.33
RAB40C-211ENST00000568586 PRKDCP78527 4128 aaKnown RBP23.34■■□□□ 1.33
RAB40C-211ENST00000568586 NOTCH3Q9UM47 2321 aa23.33■■□□□ 1.33
RAB40C-211ENST00000568586 SLC31A2O15432 143 aa23.33■■□□□ 1.33
RAB40C-211ENST00000568586 IGKV1D-33P01593 117 aa23.33■■□□□ 1.33
RAB40C-211ENST00000568586 IGKV1-33P01594 117 aa23.33■■□□□ 1.33
RAB40C-211ENST00000568586 HTD2P86397 168 aa23.33■■□□□ 1.33
RAB40C-211ENST00000568586 TCTEX1D4Q5JR98 221 aa23.33■■□□□ 1.33
RAB40C-211ENST00000568586 OR2W3Q7Z3T1 314 aa23.33■■□□□ 1.33
RAB40C-211ENST00000568586 CENPVQ7Z7K6 275 aaPredicted RBP23.33■■□□□ 1.33
RAB40C-211ENST00000568586 LYG1Q8N1E2 194 aa23.33■■□□□ 1.33
RAB40C-211ENST00000568586 FAM89BQ8N5H3 189 aa23.33■■□□□ 1.33
RAB40C-211ENST00000568586 KCNIP1Q9NZI2 227 aa23.33■■□□□ 1.33
RAB40C-211ENST00000568586 SH2D7A6NKC9 451 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-211ENST00000568586 TXNL1O43396 289 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 CD1BP29016 333 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 REG1BP48304 166 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 HES1Q14469 280 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 NSUN5P1Q3KNT7 163 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 MORN2Q502X0 79 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 PDLIM3Q53GG5 364 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-211ENST00000568586 NKAPLQ5M9Q1 402 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 ZNF367Q7RTV3 350 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 MOB3BQ86TA1 216 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 EAF1Q96JC9 268 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-211ENST00000568586 NICN1Q9BSH3 213 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 FAAP24Q9BTP7 215 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 KCNK15Q9H427 330 aa23.32■■□□□ 1.32
RAB40C-211ENST00000568586 A0A0A6YYD4 124 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 MRPS14O60783 128 aaKnown RBP23.31■■□□□ 1.32
RAB40C-211ENST00000568586 NAPSAO96009 420 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 ZNF880Q6PDB4 577 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 C6orf201Q7Z4U5 140 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 PRR18Q8N4B5 295 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 OR4F17Q8NGA8 305 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 OR4F4Q96R69 305 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 LPAR5Q9H1C0 372 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 OR2S2Q9NQN1 319 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 JPT1Q9UK76 154 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 AK6Q9Y3D8 172 aaKnown RBP23.31■■□□□ 1.32
RAB40C-211ENST00000568586 TGP01266 2768 aa23.31■■□□□ 1.32
RAB40C-211ENST00000568586 ARSBP15848 533 aa23.3■■□□□ 1.32
RAB40C-211ENST00000568586 HNF4GQ14541 408 aa23.3■■□□□ 1.32
RAB40C-211ENST00000568586 HMGN3Q15651 99 aa23.3■■□□□ 1.32
RAB40C-211ENST00000568586 SSX1Q16384 188 aa23.3■■□□□ 1.32
RAB40C-211ENST00000568586 OR10V1Q8NGI7 309 aa23.3■■□□□ 1.32
RAB40C-211ENST00000568586 FOXI3A8MTJ6 420 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-211ENST00000568586 YPEL1O60688 119 aa23.29■■□□□ 1.32
RAB40C-211ENST00000568586 CALRP27797 417 aaKnown RBP23.29■■□□□ 1.32
RAB40C-211ENST00000568586 BLVRBP30043 206 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-211ENST00000568586 PSMD7P51665 324 aa23.29■■□□□ 1.32
RAB40C-211ENST00000568586 GABARAPL2P60520 117 aa23.29■■□□□ 1.32
RAB40C-211ENST00000568586 CD200R1LQ6Q8B3 271 aa23.29■■□□□ 1.32
RAB40C-211ENST00000568586 OR2T10Q8NGZ9 312 aa23.29■■□□□ 1.32
RAB40C-211ENST00000568586 YPEL2Q96QA6 119 aa23.29■■□□□ 1.32
RAB40C-211ENST00000568586 PLGRKTQ9HBL7 147 aa23.29■■□□□ 1.32
RAB40C-211ENST00000568586 PLXNB1O43157 2135 aa23.29■■□□□ 1.32
RAB40C-211ENST00000568586 TRBV6-6A0A0A6YYG2 114 aa23.28■■□□□ 1.32
RAB40C-211ENST00000568586 LANCL1O43813 399 aa23.28■■□□□ 1.32
RAB40C-211ENST00000568586 RANBP1P43487 201 aa23.28■■□□□ 1.32
RAB40C-211ENST00000568586 Q6ZPA2 131 aa23.28■■□□□ 1.32
RAB40C-211ENST00000568586 TGIF2LXQ8IUE1 241 aa23.28■■□□□ 1.32
RAB40C-211ENST00000568586 SVOPQ8N4V2 548 aa23.28■■□□□ 1.32
RAB40C-211ENST00000568586 OR52L2PQ8NGH6 319 aa23.28■■□□□ 1.32
RAB40C-211ENST00000568586 R3HDM4Q96D70 268 aa23.28■■□□□ 1.32
RAB40C-211ENST00000568586 URM1Q9BTM9 101 aaKnown RBP23.28■■□□□ 1.32
RAB40C-211ENST00000568586 PLSCR3Q9NRY6 295 aa23.28■■□□□ 1.32
RAB40C-211ENST00000568586 HSF4Q9ULV5 492 aa23.28■■□□□ 1.32
RAB40C-211ENST00000568586 IGHV3-72A0A0B4J1Y9 119 aa23.27■■□□□ 1.32
RAB40C-211ENST00000568586 IGHG2P01859 326 aa23.27■■□□□ 1.32
RAB40C-211ENST00000568586 GNMTQ14749 295 aa23.27■■□□□ 1.32
RAB40C-211ENST00000568586 P2RY14Q15391 338 aa23.27■■□□□ 1.32
RAB40C-211ENST00000568586 RAB11BQ15907 218 aa23.27■■□□□ 1.32
RAB40C-211ENST00000568586 C9orf152Q5JTZ5 239 aa23.27■■□□□ 1.32
RAB40C-211ENST00000568586 KPRPQ5T749 579 aaPredicted RBP23.27■■□□□ 1.32
RAB40C-211ENST00000568586 C5orf24Q7Z6I8 188 aa23.27■■□□□ 1.32
RAB40C-211ENST00000568586 GALMQ96C23 342 aa23.27■■□□□ 1.32
RAB40C-211ENST00000568586 RIMS4Q9H426 269 aaPredicted RBP23.27■■□□□ 1.32
RAB40C-211ENST00000568586 PLEKHJ1Q9NW61 149 aa23.27■■□□□ 1.32
RAB40C-211ENST00000568586 NDUFB11Q9NX14 153 aa23.27■■□□□ 1.32
RAB40C-211ENST00000568586 TRAV1-2A0A0B4J238 106 aa23.26■■□□□ 1.31
RAB40C-211ENST00000568586 LDLRAD4O15165 306 aa23.26■■□□□ 1.31
RAB40C-211ENST00000568586 DENRO43583 198 aaKnown RBP23.26■■□□□ 1.31
RAB40C-211ENST00000568586 SAMD5Q5TGI4 173 aa23.26■■□□□ 1.31
RAB40C-211ENST00000568586 OR4X2Q8NGF9 303 aa23.26■■□□□ 1.31
RAB40C-211ENST00000568586 TSSC4Q9Y5U2 329 aaPredicted RBP23.26■■□□□ 1.31
RAB40C-211ENST00000568586 V9GY05 133 aa23.26■■□□□ 1.31
RAB40C-211ENST00000568586 SOCS1O15524 211 aa23.25■■□□□ 1.31
RAB40C-211ENST00000568586 MOSP00540 346 aa23.25■■□□□ 1.31
RAB40C-211ENST00000568586 GALP22466 123 aa23.25■■□□□ 1.31
RAB40C-211ENST00000568586 TMEM50BP56557 158 aa23.25■■□□□ 1.31
RAB40C-211ENST00000568586 C10orf99Q6UWK7 81 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms