RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 DNAH6Q9C0G6 4158 aa8.86□□□□□ -0.99
CLK3-222ENST00000568232 HERC1Q15751 4861 aa8.86□□□□□ -0.99
CLK3-222ENST00000568232 DNAH17Q9UFH2 4485 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 ZNF785A8K8V0 405 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 M0R129 80 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 FKBP6O75344 327 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 TRGV3P03979 118 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 TFAP2AP05549 437 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 KRT8P05787 483 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 OSMP13725 252 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 ZNF20P17024 532 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 MECP2P51608 486 aaKnown RBP8.85□□□□□ -0.99
CLK3-222ENST00000568232 ZNF137PP52743 207 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 PAX5Q02548 391 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 PIGYQ3MUY2 71 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 ACTBL2Q562R1 376 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 UNQ5815/PRO19632Q6UWF5 114 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 SAXO1Q8IYX7 474 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 TCEANCQ8N8B7 351 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 CCDC54Q8NEL0 328 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 OR10V1Q8NGI7 309 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 OR13C9Q8NGT0 318 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 CST11Q9H112 138 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 GAB2Q9UQC2 676 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 PKD1P98161 4303 aa8.85□□□□□ -0.99
CLK3-222ENST00000568232 A0A1B0GVY2 172 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 TCRBV5S2A0A599 114 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 PRKYO43930 277 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 SPATS1Q496A3 300 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 CD300EQ496F6 205 aaPredicted RBP8.84□□□□□ -0.99
CLK3-222ENST00000568232 XP32Q5T750 250 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 ZNF660Q6AZW8 331 aaPredicted RBP8.84□□□□□ -0.99
CLK3-222ENST00000568232 PYHIN1Q6K0P9 492 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 LYG2Q86SG7 212 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 PPP1R27Q86WC6 154 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 HS3ST5Q8IZT8 346 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 TCTEX1D1Q8N7M0 179 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 SUMF2Q8NBJ7 301 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 LFNGQ8NES3 379 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 NPBQ8NG41 125 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 OR10K1Q8NGX5 313 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 RDH12Q96NR8 316 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 DPCDQ9BVM2 203 aaPredicted RBP8.84□□□□□ -0.99
CLK3-222ENST00000568232 MRPL20Q9BYC9 149 aaKnown RBP8.84□□□□□ -0.99
CLK3-222ENST00000568232 VCX3BQ9H321 246 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 FBXL15Q9H469 300 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 SLC2A8Q9NY64 477 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 SLC23A1Q9UHI7 598 aa8.84□□□□□ -0.99
CLK3-222ENST00000568232 DNAH11Q96DT5 4516 aa8.83□□□□□ -1
CLK3-222ENST00000568232 A0A1W2PQL4 384 aaPredicted RBP8.83□□□□□ -1
CLK3-222ENST00000568232 METTL15A6NJ78 407 aa8.83□□□□□ -1
CLK3-222ENST00000568232 LANCL1O43813 399 aa8.83□□□□□ -1
CLK3-222ENST00000568232 NDUFA3O95167 84 aa8.83□□□□□ -1
CLK3-222ENST00000568232 TRBV12-3P01733 135 aa8.83□□□□□ -1
CLK3-222ENST00000568232 CSTBP04080 98 aaKnown RBP8.83□□□□□ -1
CLK3-222ENST00000568232 UBCP0CG48 685 aaKnown RBP8.83□□□□□ -1
CLK3-222ENST00000568232 PRKACGP22612 351 aa8.83□□□□□ -1
CLK3-222ENST00000568232 DEFA5Q01523 94 aa8.83□□□□□ -1
CLK3-222ENST00000568232 TNFRSF9Q07011 255 aa8.83□□□□□ -1
CLK3-222ENST00000568232 TMEM267Q0VDI3 215 aaPredicted RBP8.83□□□□□ -1
CLK3-222ENST00000568232 CD200R1LQ6Q8B3 271 aa8.83□□□□□ -1
CLK3-222ENST00000568232 SLA2Q9H6Q3 261 aa8.83□□□□□ -1
CLK3-222ENST00000568232 MUC4Q99102 2169 aa8.82□□□□□ -1
CLK3-222ENST00000568232 C13orf42A0A1B0GVH6 325 aa8.82□□□□□ -1
CLK3-222ENST00000568232 TMEM30CPA0ZSE6 113 aa8.82□□□□□ -1
CLK3-222ENST00000568232 MT-ND2P03891 347 aa8.82□□□□□ -1
CLK3-222ENST00000568232 DBTP11182 482 aaKnown RBP8.82□□□□□ -1
CLK3-222ENST00000568232 KCNJ3P48549 501 aa8.82□□□□□ -1
CLK3-222ENST00000568232 MS4A2Q01362 244 aa8.82□□□□□ -1
CLK3-222ENST00000568232 KISS1Q15726 138 aa8.82□□□□□ -1
CLK3-222ENST00000568232 AKIRIN2Q53H80 203 aa8.82□□□□□ -1
CLK3-222ENST00000568232 ELP2Q6IA86 826 aa8.82□□□□□ -1
CLK3-222ENST00000568232 OR51A4Q8NGJ6 313 aa8.82□□□□□ -1
CLK3-222ENST00000568232 PHLDA1Q8WV24 401 aaPredicted RBP8.82□□□□□ -1
CLK3-222ENST00000568232 CLCC1Q96S66 551 aa8.82□□□□□ -1
CLK3-222ENST00000568232 THTPAQ9BU02 230 aa8.82□□□□□ -1
CLK3-222ENST00000568232 TEX12Q9BXU0 123 aa8.82□□□□□ -1
CLK3-222ENST00000568232 MAGIXQ9H6Y5 334 aa8.82□□□□□ -1
CLK3-222ENST00000568232 ZNF355PQ9NSJ1 428 aa8.82□□□□□ -1
CLK3-222ENST00000568232 GNG12Q9UBI6 72 aa8.82□□□□□ -1
CLK3-222ENST00000568232 SELENOKQ9Y6D0 94 aa8.82□□□□□ -1
CLK3-222ENST00000568232 ORC5O43913 435 aa8.81□□□□□ -1
CLK3-222ENST00000568232 MITFO75030 526 aaPredicted RBP8.81□□□□□ -1
CLK3-222ENST00000568232 CD40LGP29965 261 aa8.81□□□□□ -1
CLK3-222ENST00000568232 ALDH3A2P51648 485 aa8.81□□□□□ -1
CLK3-222ENST00000568232 IL13RA2Q14627 380 aa8.81□□□□□ -1
CLK3-222ENST00000568232 GUCA2BQ16661 112 aa8.81□□□□□ -1
CLK3-222ENST00000568232 Q3ZCU0 254 aa8.81□□□□□ -1
CLK3-222ENST00000568232 TP53I3Q53FA7 332 aa8.81□□□□□ -1
CLK3-222ENST00000568232 AADACL4Q5VUY2 407 aa8.81□□□□□ -1
CLK3-222ENST00000568232 TMEM244Q5VVB8 128 aa8.81□□□□□ -1
CLK3-222ENST00000568232 C1orf146Q5VVC0 180 aa8.81□□□□□ -1
CLK3-222ENST00000568232 ODF3L1Q8IXM7 274 aa8.81□□□□□ -1
CLK3-222ENST00000568232 PRR18Q8N4B5 295 aa8.81□□□□□ -1
CLK3-222ENST00000568232 H2AFY2Q9P0M6 372 aaPredicted RBP8.81□□□□□ -1
CLK3-222ENST00000568232 RNF150Q9ULK6 438 aa8.81□□□□□ -1
CLK3-222ENST00000568232 HSPG2P98160 4391 aa8.81□□□□□ -1
CLK3-222ENST00000568232 ELOA3CA0A087WX78 387 aaPredicted RBP8.8□□□□□ -1
CLK3-222ENST00000568232 RRHO14718 337 aa8.8□□□□□ -1
CLK3-222ENST00000568232 CST1P01037 141 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms