RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, human

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-215	ENST00000566843	PATE4	P0C8F1	98 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	EDN3	P14138	238 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	NTF4	P34130	210 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	ACTL10	Q5JWF8	245 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	ZNF66	Q6ZN08	573 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	WDR61	Q9GZS3	305 aa	Known RBP	13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	PROK2	Q9HC23	129 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	PSENEN	Q9NZ42	101 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843		H7BYZ3	331 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	TNFSF11	O14788	317 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	DNPH1	O43598	174 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	SCRG1	O75711	98 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	HRAS	P01112	189 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	TYMS	P04818	313 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	S100G	P29377	79 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	CCKAR	P32238	428 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	RAC1	P63000	192 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	ZXDA	P98168	799 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	MEF2B	Q02080	365 aa	Predicted RBP	13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	BATF2	Q8N1L9	274 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	OR5B12	Q96R08	314 aa		13.37	□□□□□ -0.27
COMMD4-215	ENST00000566843	TRBV6-6	A0A0A6YYG2	114 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843		B4E171	279 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	CYTIP	O60759	359 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	GGCT	O75223	188 aa	Known RBP	13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	METTL15P1	P0C7V9	234 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	PSG2	P11465	335 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	B4GALT1	P15291	398 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	TSPAN7	P41732	249 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	ERVS71-1	P61550	626 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	HBG1	P69891	147 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	HBG2	P69892	147 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	SLC25A45	Q8N413	288 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	CADM4	Q8NFZ8	388 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	FGFBP3	Q8TAT2	258 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	TMEM18	Q96B42	140 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	HS3ST6	Q96QI5	342 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	OR6C1	Q96RD1	312 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	STRADB	Q9C0K7	418 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	TIMM9	Q9Y5J7	89 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	IGKV1-39	P01597	117 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	IGKV1D-39	P04432	117 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	SERPINE2	P07093	398 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	CXCL12	P48061	93 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	PCBD1	P61457	104 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	HNF4G	Q14541	408 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	ANAPC16	Q96DE5	110 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	PCGF1	Q9BSM1	259 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	C1QTNF5	Q9BXJ0	243 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	FGF23	Q9GZV9	251 aa	Predicted RBP	13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	PCED1A	Q9H1Q7	454 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	RIMS4	Q9H426	269 aa	Predicted RBP	13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	OR2W1	Q9Y3N9	320 aa		13.36	□□□□□ -0.27
COMMD4-215	ENST00000566843	SPAG17	Q6Q759	2223 aa		13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	CYC1	P08574	325 aa		13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	TNFRSF9	Q07011	255 aa		13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	NECAP1	Q8NC96	275 aa		13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	LHX4	Q969G2	390 aa		13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	OR4C12	Q96R67	309 aa		13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	PRDM14	Q9GZV8	571 aa		13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	PLK3	Q9H4B4	646 aa		13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	SLC39A9	Q9NUM3	307 aa		13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	CACNG5	Q9UF02	275 aa		13.35	□□□□□ -0.27
COMMD4-215	ENST00000566843	LRRC3C	A6NJW4	275 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843		K7ESF4	209 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	CCL3	P10147	92 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	IAPP	P10997	89 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	SRP14	P37108	136 aa	Known RBP	13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	RAC3	P60763	192 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	PCOLCE	Q15113	449 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	IZUMO4	Q1ZYL8	232 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	COLCA1	Q6ZS62	124 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	CISD2	Q8N5K1	135 aa	Known RBP	13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	MRPL30	Q8TCC3	161 aa	Known RBP	13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	TAF15	Q92804	592 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	FOXB1	Q99853	325 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	OR6C3	Q9NZP0	311 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	LRP5L	A4QPB2	252 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	CD300LB	A8K4G0	201 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	OR4A8	P0C604	315 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	TUBG1	P23258	451 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	CHD3	Q12873	2000 aa	Known RBP	13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	IQCJ	Q1A5X6	159 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	RPP25L	Q8N5L8	163 aa	Known RBP	13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	ELOVL1	Q9BW60	279 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	SNHG12	Q9BXW3	62 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	SH2D2A	Q9NP31	389 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	CBY1	Q9Y3M2	126 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	ABCA7	Q8IZY2	2146 aa		13.34	□□□□□ -0.27
COMMD4-215	ENST00000566843	GJE1	A6NN92	205 aa		13.33	□□□□□ -0.28
COMMD4-215	ENST00000566843	ZNF716	A6NP11	495 aa		13.33	□□□□□ -0.28
COMMD4-215	ENST00000566843	IGKV1D-33	P01593	117 aa		13.33	□□□□□ -0.28
COMMD4-215	ENST00000566843	IGKV1-33	P01594	117 aa		13.33	□□□□□ -0.28
COMMD4-215	ENST00000566843	IGKV1-5	P01602	117 aa		13.33	□□□□□ -0.28
COMMD4-215	ENST00000566843	PAX5	Q02548	391 aa		13.33	□□□□□ -0.28
COMMD4-215	ENST00000566843	PRDX4	Q13162	271 aa		13.33	□□□□□ -0.28

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