RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 S100A12P80511 92 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 SRSF3P84103 164 aaKnown RBP9.93□□□□□ -0.82
CDH1-210ENST00000566612 IL24Q13007 206 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 OR52L2PQ8NGH6 319 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 RSG1Q9BU20 258 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 REPIN1Q9BWE0 567 aaKnown RBP9.93□□□□□ -0.82
CDH1-210ENST00000566612 ZNF71Q9NQZ8 489 aaPredicted RBP9.93□□□□□ -0.82
CDH1-210ENST00000566612 GAPDHP04406 335 aaKnown RBP9.92□□□□□ -0.82
CDH1-210ENST00000566612 TVP23CQ96ET8 276 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 CYYR1Q96J86 154 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 CABLES2Q9BTV7 478 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 C1QTNF5Q9BXJ0 243 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 H7BYZ3 331 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 ST8SIA5O15466 376 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 FTH1P19P0C7X4 201 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 COX5AP20674 150 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 HGFACQ04756 655 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 CSRP2Q16527 193 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 HIST3H3Q16695 136 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 FDCSPQ8NFU4 85 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 NANPQ8TBE9 248 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 GUCD1Q96NT3 240 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 ATP5SQ99766 215 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 ABCA4P78363 2273 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 MAP1LC3B2A6NCE7 125 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 ZNF705GA8MUZ8 300 aaPredicted RBP9.92□□□□□ -0.82
CDH1-210ENST00000566612 MKRN2OSH3BPM6 223 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 SPP1P10451 314 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 SLC25A6P12236 298 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 HLA-GP17693 338 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 CLDN18P56856 261 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 ABLIM2Q6H8Q1 611 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 LYG1Q8N1E2 194 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 UBAC2Q8NBM4 344 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 OR1L1Q8NH94 360 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 ABHD14BQ96IU4 210 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
CDH1-210ENST00000566612 MAP1LC3BQ9GZQ8 125 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 OPN3Q9H1Y3 402 aaPredicted RBP9.92□□□□□ -0.82
CDH1-210ENST00000566612 CHD9Q3L8U1 2897 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 PROB1E7EW31 1015 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 G3V3Q6 166 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 PPP1R2P9O14990 202 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 CELA3BP08861 270 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 DHRS11Q6UWP2 260 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 MOGAT3Q86VF5 341 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 SELENOHQ8IZQ5 122 aaKnown RBP9.92□□□□□ -0.82
CDH1-210ENST00000566612 WBP1Q96G27 269 aa9.92□□□□□ -0.82
CDH1-210ENST00000566612 MED13LQ71F56 2210 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 A0A1W2PPE3 182 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 AQP7O14520 342 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 WNT9BO14905 357 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 FFAR4Q5NUL3 377 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 INO80CQ6PI98 192 aaPredicted RBP9.91□□□□□ -0.82
CDH1-210ENST00000566612 GPR146Q96CH1 333 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 TAAR6Q96RI8 345 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 NCOA6Q14686 2063 aaPredicted RBP9.91□□□□□ -0.82
CDH1-210ENST00000566612 BTBD17A6NE02 478 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 LRRC30A6NM36 301 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 F8VVB4 439 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 F8VWA3 439 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 RRP8O43159 456 aaKnown RBP9.91□□□□□ -0.82
CDH1-210ENST00000566612 SULT1A1P50225 295 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 ZNF528Q3MIS6 628 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 CIB3Q96Q77 187 aaPredicted RBP9.91□□□□□ -0.82
CDH1-210ENST00000566612 CLN8Q9UBY8 286 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 PRSS44E7EML9 344 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 NAT1P18440 290 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 RPS23P62266 143 aaKnown RBP9.91□□□□□ -0.82
CDH1-210ENST00000566612 PINX1Q96BK5 328 aaKnown RBP9.91□□□□□ -0.82
CDH1-210ENST00000566612 TCEAL7Q9BRU2 100 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 CACFD1Q9UGQ2 172 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 FREM1Q5H8C1 2179 aa9.91□□□□□ -0.82
CDH1-210ENST00000566612 WIPF3A6NGB9 483 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 ZNF891A8MT65 544 aaPredicted RBP9.9□□□□□ -0.82
CDH1-210ENST00000566612 CDK2AP1O14519 115 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 KLF3P57682 345 aaPredicted RBP9.9□□□□□ -0.82
CDH1-210ENST00000566612 FABP9Q0Z7S8 132 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 BHLHA15Q7RTS1 189 aaPredicted RBP9.9□□□□□ -0.82
CDH1-210ENST00000566612 C1orf87Q8N0U7 546 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 KLF14Q8TD94 323 aaPredicted RBP9.9□□□□□ -0.82
CDH1-210ENST00000566612 OR5P3Q8WZ94 311 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 GLRX2Q9NS18 164 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 A0A1W2PPQ1 181 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 LHFPL1Q86WI0 220 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 TMEM45BQ96B21 275 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 RARRES2Q99969 163 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 LINC00470Q9BZP3 86 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 PROK2Q9HC23 129 aa9.9□□□□□ -0.82
CDH1-210ENST00000566612 TIMM8BQ9Y5J9 83 aaPredicted RBP9.9□□□□□ -0.82
CDH1-210ENST00000566612 TRGV10A0A0A0MS01 117 aa9.9□□□□□ -0.83
CDH1-210ENST00000566612 IGKV1D-13A0A0B4J2D9 117 aa9.9□□□□□ -0.83
CDH1-210ENST00000566612 A0A1B0GU03 582 aa9.9□□□□□ -0.83
CDH1-210ENST00000566612 IGKV1-13P0DP09 117 aa9.9□□□□□ -0.83
CDH1-210ENST00000566612 CD200P41217 278 aa9.9□□□□□ -0.83
CDH1-210ENST00000566612 MSI2Q96DH6 328 aaKnown RBP9.9□□□□□ -0.83
CDH1-210ENST00000566612 LAMP3Q9UQV4 416 aa9.9□□□□□ -0.83
CDH1-210ENST00000566612 PTPRSQ13332 1948 aa9.9□□□□□ -0.83
CDH1-210ENST00000566612 OOEPA6NGQ2 149 aa9.89□□□□□ -0.83
CDH1-210ENST00000566612 HBZP02008 142 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms