RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 HTD2P86397 168 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 HES1Q14469 280 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 HABP2Q14520 560 aaPredicted RBP15.88■□□□□ 0.13
CMTM3-211ENST00000565922 ZNF773Q6PK81 442 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 SLC25A48Q6ZT89 311 aaKnown RBP15.88■□□□□ 0.13
CMTM3-211ENST00000565922 FAM89BQ8N5H3 189 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 DRAM1Q8N682 238 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 OR51D1Q8NGF3 324 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 OR1L1Q8NH94 360 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 CFHR4Q92496 578 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 GALMQ96C23 342 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 CHMP1AQ9HD42 196 aaPredicted RBP15.88■□□□□ 0.13
CMTM3-211ENST00000565922 HSF4Q9ULV5 492 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 MGAT4AQ9UM21 535 aa15.88■□□□□ 0.13
CMTM3-211ENST00000565922 IGHV1-3A0A0C4DH29 117 aa15.87■□□□□ 0.13
CMTM3-211ENST00000565922 TMEM11P17152 192 aa15.87■□□□□ 0.13
CMTM3-211ENST00000565922 RAB3BP20337 219 aa15.87■□□□□ 0.13
CMTM3-211ENST00000565922 OR56B1Q8NGI3 324 aa15.87■□□□□ 0.13
CMTM3-211ENST00000565922 NBEAL1Q6ZS30 2694 aa15.87■□□□□ 0.13
CMTM3-211ENST00000565922 A0A0A6YYD4 124 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 FBXO24O75426 580 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 NAPSAO96009 420 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 CSF1P09603 554 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 FGF9P31371 208 aaPredicted RBP15.86■□□□□ 0.13
CMTM3-211ENST00000565922 ZNF137PP52743 207 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 CLDN12P56749 244 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 HMGN3Q15651 99 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 C2orf76Q3KRA6 126 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 ABCA11PQ4W5N1 156 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 HES5Q5TA89 166 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 MOB3BQ86TA1 216 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 ZNF439Q8NDP4 499 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 OR10V1Q8NGI7 309 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 RTN4IP1Q8WWV3 396 aaPredicted RBP15.86■□□□□ 0.13
CMTM3-211ENST00000565922 RAB22AQ9UL26 194 aa15.86■□□□□ 0.13
CMTM3-211ENST00000565922 IFITM5A6NNB3 132 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 SOCS1O15524 211 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 YPEL1O60688 119 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 IGKV1D-33P01593 117 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 IGKV1-33P01594 117 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 VEGFCP49767 419 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 DIAPH2-AS1Q14236 149 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 KCTD21Q4G0X4 260 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 MORN2Q502X0 79 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 LY6G6FQ5SQ64 297 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 C22orf42Q6IC83 251 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 TGIF2LXQ8IUE1 241 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 IZUMO1Q8IYV9 350 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 ST6GALNAC6Q969X2 333 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 YPEL2Q96QA6 119 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 ABHD14AQ9BUJ0 271 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 WNT10AQ9GZT5 417 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 STUB1Q9UNE7 303 aa15.85■□□□□ 0.13
CMTM3-211ENST00000565922 TRBV6-6A0A0A6YYG2 114 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 LDLRAD4O15165 306 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 FGF16O43320 207 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 REG1BP48304 166 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 CT45A1Q5HYN5 189 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 ZNF880Q6PDB4 577 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 CT45A3Q8NHU0 189 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 SETD6Q8TBK2 473 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 C12orf4Q9NQ89 552 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 SSR3Q9UNL2 185 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 WNK1Q9H4A3 2382 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 TRRAPQ9Y4A5 3859 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 MGAM2Q2M2H8 2515 aa15.84■□□□□ 0.13
CMTM3-211ENST00000565922 TMEM272A0A1B0GTI8 110 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 FOXI3A8MTJ6 420 aaPredicted RBP15.83■□□□□ 0.12
CMTM3-211ENST00000565922 SLC31A2O15432 143 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 RAB6AP20340 208 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 GADD45AP24522 165 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 CD1BP29016 333 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 OR10A3P58181 314 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 MRPS15P82914 257 aaKnown RBP15.83■□□□□ 0.12
CMTM3-211ENST00000565922 EBI3Q14213 229 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 Q6ZS46 218 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 LYG1Q8N1E2 194 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 C11orf44Q8N8P7 122 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 OR2AK2Q8NG84 335 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 OR52L2PQ8NGH6 319 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 OR2T10Q8NGZ9 312 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 IL1F10Q8WWZ1 152 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 TXNL4BQ9NX01 149 aaKnown RBP15.83■□□□□ 0.12
CMTM3-211ENST00000565922 AK3Q9UIJ7 227 aa15.83■□□□□ 0.12
CMTM3-211ENST00000565922 METTL21EPA6NDL7 271 aa15.82■□□□□ 0.12
CMTM3-211ENST00000565922 LANCL1O43813 399 aa15.82■□□□□ 0.12
CMTM3-211ENST00000565922 ZNF134P52741 427 aa15.82■□□□□ 0.12
CMTM3-211ENST00000565922 TMEM95Q3KNT9 176 aa15.82■□□□□ 0.12
CMTM3-211ENST00000565922 C9orf152Q5JTZ5 239 aa15.82■□□□□ 0.12
CMTM3-211ENST00000565922 FAM53AQ6NSI3 398 aaPredicted RBP15.82■□□□□ 0.12
CMTM3-211ENST00000565922 TPRA1Q86W33 373 aa15.82■□□□□ 0.12
CMTM3-211ENST00000565922 PTX4Q96A99 478 aa15.82■□□□□ 0.12
CMTM3-211ENST00000565922 ARHGAP5-AS1Q96IT6 56 aa15.82■□□□□ 0.12
CMTM3-211ENST00000565922 CMSS1Q9BQ75 279 aaKnown RBP15.82■□□□□ 0.12
CMTM3-211ENST00000565922 PECRQ9BY49 303 aa15.82■□□□□ 0.12
CMTM3-211ENST00000565922 SHISA3A0PJX4 238 aa15.81■□□□□ 0.12
CMTM3-211ENST00000565922 TSPAN15O95858 294 aa15.81■□□□□ 0.12
CMTM3-211ENST00000565922 AMY1AP04745 511 aa15.81■□□□□ 0.12
CMTM3-211ENST00000565922 AMY2AP04746 511 aa15.81■□□□□ 0.12
CMTM3-211ENST00000565922 PPP1CCP36873 323 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms