RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 TRDCB7Z8K6 153 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 MFNGO00587 321 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 YPEL1O60688 119 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 SOX6P35712 828 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 GDNFP39905 211 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 MNDAP41218 407 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 RAB7AP51149 207 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 PLA2G7Q13093 441 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 HMGN3Q15651 99 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 SSX2Q16385 188 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 HACD4Q5VWC8 232 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 PRR18Q8N4B5 295 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 OR10X1Q8NGY0 326 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 SETD6Q8TBK2 473 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 AJUBAQ96IF1 538 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 YPEL2Q96QA6 119 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 Q9N2K0 584 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 KCNK7Q9Y2U2 307 aa10.2□□□□□ -0.78
SHCBP1-204ENST00000565887 MDFIC2A0A1B0GVS7 189 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 LY6LH3BQJ8 138 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 ITGB1BP1O14713 200 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 GNB3P16520 340 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 ZNF182P17025 639 aaPredicted RBP10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 DTYMKP23919 212 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 ZBTB25P24278 435 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 LTC4SQ16873 150 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 MOGAT2Q3SYC2 334 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 MORN2Q502X0 79 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 UBE2NLQ5JXB2 153 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 Q6ZS49 121 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 LHFPL4Q7Z7J7 247 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 CLVS1Q8IUQ0 354 aaPredicted RBP10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 OR8H3Q8N146 312 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 OR4A4PQ8NGN8 299 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 OR1L1Q8NH94 360 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 RPEQ96AT9 228 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 VPREB3Q9UKI3 123 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 HILPDAQ9Y5L2 63 aa10.19□□□□□ -0.78
SHCBP1-204ENST00000565887 A0A1B0GUS0 222 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 HSPA12AO43301 675 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 XRCC3O43542 346 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 IGHV4-59P01825 116 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 APOA1P02647 267 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 GAPDHP04406 335 aaKnown RBP10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 CTXN2P0C2S0 81 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 TGFBR1P36897 503 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 FOXL1Q12952 345 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 KRTAP24-1Q3LI83 254 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 ZNF260Q3ZCT1 412 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 TPTE2P1Q5T6R2 138 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 SLC25A48Q6ZT89 311 aaKnown RBP10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 THNSL2Q86YJ6 484 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 OR5H6Q8NGV6 325 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 EDARADDQ8WWZ3 215 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 GCDHQ92947 438 aaPredicted RBP10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 C19orf24Q9BVV8 132 aa10.18□□□□□ -0.78
SHCBP1-204ENST00000565887 A0A075B6Q4 140 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 TRAV18A0A075B6X5 111 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 FAM172BPA6NC97 362 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 H3BUX3 64 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 TXNL1O43396 289 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 TPPPO94811 219 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 FCGR3AP08637 254 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 FAM106CPP0CH98 169 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 HKR1P10072 659 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 CBX5P45973 191 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 GNG2P59768 71 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 ACTG1P63261 375 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 HLA-DRB3P79483 266 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 BAIAP2L2Q6UXY1 529 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 C16orf82Q7Z2V1 217 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 SAMD12Q8N8I0 201 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 C17orf50Q8WW18 174 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 IL1F10Q8WWZ1 152 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 TOMM40LQ969M1 308 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 SLC25A38Q96DW6 304 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 AKR1E2Q96JD6 320 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 CHIAQ9BZP6 476 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 NAA50Q9GZZ1 169 aaKnown RBP10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 COL6A5A8TX70 2615 aa10.17□□□□□ -0.78
SHCBP1-204ENST00000565887 IGHV3-43A0A0B4J1X8 118 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 TMEM89A2RUT3 159 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 FAM181BA6NEQ2 426 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 FABP7O15540 132 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 IGHV3-43DP0DP04 118 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 CEACAM6P40199 344 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 GNG10P50151 68 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 ZNF137PP52743 207 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 ZNF816Q0VGE8 651 aaPredicted RBP10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 CT45A1Q5HYN5 189 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 OLFML2AQ68BL7 652 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 ZNF439Q8NDP4 499 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 OR2AK2Q8NG84 335 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 OR10J5Q8NHC4 309 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 CT45A3Q8NHU0 189 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 SPATA3Q8NHX4 192 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 C15orf40Q8WUR7 153 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 LEAP2Q969E1 77 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 DUX5Q96PT3 197 aa10.16□□□□□ -0.78
SHCBP1-204ENST00000565887 HDHD3Q9BSH5 251 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms