RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 SNAPC3Q92966 411 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 DACT3Q96B18 629 aaPredicted RBP6.39□□□□□ -1.39
CDH1-208ENST00000565810 YPEL2Q96QA6 119 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 CABLES2Q9BTV7 478 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 SUCNR1Q9BXA5 334 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 TMEM133Q9H2Q1 129 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 SIRT7Q9NRC8 400 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 ABCB10Q9NRK6 738 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 GFOD1Q9NXC2 390 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 EHFQ9NZC4 300 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 ZNF69Q9UC07 566 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 RBM7Q9Y580 266 aaKnown RBP6.39□□□□□ -1.39
CDH1-208ENST00000565810 MALRD1Q5VYJ5 2156 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 CCDC168Q8NDH2 2452 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 PDZD2O15018 2839 aa6.39□□□□□ -1.39
CDH1-208ENST00000565810 TRBV6-7A0A0A0MS04 114 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 IGHV3-43A0A0B4J1X8 118 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 LINC00854A0A1B0GVQ3 168 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 ANKRD20A5PA0PJZ0 165 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 FAM172BPA6NC97 362 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 J3QRK9 145 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 LANCL1O43813 399 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 CD3DP04234 171 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 IGHV3-43DP0DP04 118 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 IL7P13232 177 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 MMP9P14780 707 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 COX7A1P24310 79 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 RFX2P48378 723 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 LGALS4P56470 323 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 HERV-K104P61576 105 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 DYRK1AQ13627 763 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 MORN2Q502X0 79 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 IGSF11Q5DX21 431 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 LY6G6FQ5SQ64 297 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 VAX1Q5SQQ9 334 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 GPR157Q5UAW9 335 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 OVCH2Q7RTZ1 564 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 C5orf24Q7Z6I8 188 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 C11orf42Q8N5U0 333 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 Q8N7P7 452 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 OR2AK2Q8NG84 335 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 OR9G1Q8NH87 305 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 ZNF596Q8TC21 504 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 LHX4Q969G2 390 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 BORCS5Q969J3 196 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 TRIM63Q969Q1 353 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 SDHCQ99643 169 aaPredicted RBP6.38□□□□□ -1.39
CDH1-208ENST00000565810 C7orf50Q9BRJ6 194 aaKnown RBP6.38□□□□□ -1.39
CDH1-208ENST00000565810 TMUB1Q9BVT8 246 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 CLEC7AQ9BXN2 247 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 SIRPDQ9H106 197 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 UNKLQ9H9P5 680 aaKnown RBP6.38□□□□□ -1.39
CDH1-208ENST00000565810 MCUBQ9NWR8 336 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 RDH8Q9NYR8 311 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 SCP2D1Q9UJQ7 156 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 SVEP1Q4LDE5 3571 aa6.38□□□□□ -1.39
CDH1-208ENST00000565810 A0A087X0M5 115 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 IGKV1-6A0A0C4DH72 117 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 A0A1B0GX30 115 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 NAP1L6A6NFF2 107 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 A8MV72 311 aaPredicted RBP6.37□□□□□ -1.39
CDH1-208ENST00000565810 M0QYG6 137 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 ITGB1BP1O14713 200 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 UPK1BO75841 260 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 MMP23AO75900 390 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 CD74P04233 296 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 AMY2AP04746 511 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 ARG1P05089 322 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 NFYAP23511 347 aaPredicted RBP6.37□□□□□ -1.39
CDH1-208ENST00000565810 IL3RAP26951 378 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 FCGR2CP31995 323 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 PPP1CCP36873 323 aaKnown RBP6.37□□□□□ -1.39
CDH1-208ENST00000565810 GNG10P50151 68 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 RAB7AP51149 207 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 LOXL3P58215 753 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 DEFA1P59665 94 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 DEFA3P59666 94 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 KLF9Q13886 244 aaPredicted RBP6.37□□□□□ -1.39
CDH1-208ENST00000565810 HERPUD1Q15011 391 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 DHRS11Q6UWP2 260 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 PNKDQ8N490 385 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 ARRDC1Q8N5I2 433 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 OR10X1Q8NGY0 326 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 NANPQ8TBE9 248 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 FAM216AQ8WUB2 273 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 GIMAP1Q8WWP7 306 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 TNFRSF14Q92956 283 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 CREB3L1Q96BA8 519 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 UPRTQ96BW1 309 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 TBX15Q96SF7 602 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 PRRT1Q99946 306 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 ZNF2Q9BSG1 426 aaPredicted RBP6.37□□□□□ -1.39
CDH1-208ENST00000565810 ABHD14AQ9BUJ0 271 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 TMPRSS13Q9BYE2 586 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 TINAGL1Q9GZM7 467 aaPredicted RBP6.37□□□□□ -1.39
CDH1-208ENST00000565810 TOLLIPQ9H0E2 274 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 GHITMQ9H3K2 345 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 HRASLSQ9HDD0 168 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 YAE1D1Q9NRH1 226 aa6.37□□□□□ -1.39
CDH1-208ENST00000565810 OR1A1Q9P1Q5 309 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms