RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 KRTAP10-11P60412 298 aa14.64□□□□□ -0.07
CLN6-204ENST00000564752 ZNF816Q0VGE8 651 aaPredicted RBP14.64□□□□□ -0.07
CLN6-204ENST00000564752 Q3ZCU0 254 aa14.64□□□□□ -0.07
CLN6-204ENST00000564752 KHDC1LQ5JSQ8 128 aa14.64□□□□□ -0.07
CLN6-204ENST00000564752 OR10K2Q6IF99 312 aa14.64□□□□□ -0.07
CLN6-204ENST00000564752 LINC00311Q8N616 119 aa14.64□□□□□ -0.07
CLN6-204ENST00000564752 C8orf31Q8N9H6 132 aa14.64□□□□□ -0.07
CLN6-204ENST00000564752 OR6M1Q8NGM8 313 aa14.64□□□□□ -0.07
CLN6-204ENST00000564752 KCNG3Q8TAE7 436 aa14.64□□□□□ -0.07
CLN6-204ENST00000564752 NEDD4LQ96PU5 975 aa14.64□□□□□ -0.07
CLN6-204ENST00000564752 DNAH9Q9NYC9 4486 aa14.64□□□□□ -0.07
CLN6-204ENST00000564752 SLC22A1O15245 554 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 ARL6IP5O75915 188 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 GAPDHP04406 335 aaKnown RBP14.63□□□□□ -0.07
CLN6-204ENST00000564752 CPEP16870 476 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 RCC1P18754 421 aaPredicted RBP14.63□□□□□ -0.07
CLN6-204ENST00000564752 REG1BP48304 166 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 RPS27AP62979 156 aaKnown RBP14.63□□□□□ -0.07
CLN6-204ENST00000564752 TBCEQ15813 527 aaPredicted RBP14.63□□□□□ -0.07
CLN6-204ENST00000564752 FAM53AQ6NSI3 398 aaPredicted RBP14.63□□□□□ -0.07
CLN6-204ENST00000564752 LINC00482Q8N8I6 264 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 OR10V1Q8NGI7 309 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 OR1L1Q8NH94 360 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 MGLLQ99685 303 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 KCNK15Q9H427 330 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 PLGRKTQ9HBL7 147 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 KCNIP1Q9NZI2 227 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 RAB26Q9ULW5 256 aa14.63□□□□□ -0.07
CLN6-204ENST00000564752 KMT2CQ8NEZ4 4911 aaKnown RBP14.63□□□□□ -0.07
CLN6-204ENST00000564752 IGHV1-3A0A0C4DH29 117 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 ATP6V1G2O95670 118 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 BPNT1O95861 308 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 IGKV1D-33P01593 117 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 IGKV1-33P01594 117 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 CHATP28329 748 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 UNC119Q13432 240 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 TMEM91Q6ZNR0 172 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 MOB3BQ86TA1 216 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 ZNF329Q86UD4 541 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 C5orf56Q8N8D9 126 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 MRPL30Q8TCC3 161 aaKnown RBP14.62□□□□□ -0.07
CLN6-204ENST00000564752 CYYR1Q96J86 154 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 TAF9BQ9HBM6 251 aa14.62□□□□□ -0.07
CLN6-204ENST00000564752 MBNL3Q9NUK0 354 aaKnown RBP14.62□□□□□ -0.07
CLN6-204ENST00000564752 SLC31A2O15432 143 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 FGF16O43320 207 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 EGFEM1PQ0D2K5 195 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 HNF4GQ14541 408 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 ETV3LQ6ZN32 361 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 SLC25A48Q6ZT89 311 aaKnown RBP14.61□□□□□ -0.07
CLN6-204ENST00000564752 ZNF367Q7RTV3 350 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 ZNF554Q86TJ5 538 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 MRPL41Q8IXM3 137 aaKnown RBP14.61□□□□□ -0.07
CLN6-204ENST00000564752 CHPT1Q8WUD6 406 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 NOL4LQ96MY1 436 aaPredicted RBP14.61□□□□□ -0.07
CLN6-204ENST00000564752 SULT4A1Q9BR01 284 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 NICN1Q9BSH3 213 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 TM2D1Q9BX74 207 aa14.61□□□□□ -0.07
CLN6-204ENST00000564752 IGHV3-72A0A0B4J1Y9 119 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 WI2-2373I1.2A0A1W2PRP0 233 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 TMEM14DPA8MWL7 114 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 SLC17A2O00624 439 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 CALRP27797 417 aaKnown RBP14.6□□□□□ -0.07
CLN6-204ENST00000564752 RPL23AP62750 156 aaKnown RBP14.6□□□□□ -0.07
CLN6-204ENST00000564752 FABP5Q01469 135 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 EBI3Q14213 229 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 P2RY14Q15391 338 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 C6orf201Q7Z4U5 140 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 IZUMO1Q8IYV9 350 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 ZNF439Q8NDP4 499 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 RTN4IP1Q8WWV3 396 aaPredicted RBP14.6□□□□□ -0.07
CLN6-204ENST00000564752 ACOT13Q9NPJ3 140 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 OR2S2Q9NQN1 319 aa14.6□□□□□ -0.07
CLN6-204ENST00000564752 AK6Q9Y3D8 172 aaKnown RBP14.6□□□□□ -0.07
CLN6-204ENST00000564752 TXNL1O43396 289 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 IGHG2P01859 326 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 CD37P11049 281 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 ARSBP15848 533 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 BLVRBP30043 206 aaPredicted RBP14.59□□□□□ -0.07
CLN6-204ENST00000564752 THBS3P49746 956 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 QRFPP83859 136 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 RAB11BQ15907 218 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 DEFB121Q5J5C9 76 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 OR2W3Q7Z3T1 314 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 TGIF2LXQ8IUE1 241 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 OR51D1Q8NGF3 324 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 ST6GALNAC6Q969X2 333 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 GFI1Q99684 422 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 URM1Q9BTM9 101 aaKnown RBP14.59□□□□□ -0.07
CLN6-204ENST00000564752 FAAP24Q9BTP7 215 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 ZFP57Q9NU63 452 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 JPT1Q9UK76 154 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 COL7A1Q02388 2944 aa14.59□□□□□ -0.07
CLN6-204ENST00000564752 SERPINE3A8MV23 424 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 HOXD3P31249 432 aaPredicted RBP14.58□□□□□ -0.08
CLN6-204ENST00000564752 ZNF137PP52743 207 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 GABARAPL2P60520 117 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 GNMTQ14749 295 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 CT45A1Q5HYN5 189 aa14.58□□□□□ -0.08
CLN6-204ENST00000564752 VAX1Q5SQQ9 334 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms