RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 MAS1P04201 325 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 OR5H8P0DN80 308 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 MGMTP16455 207 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 CELP19835 753 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 CDX1P47902 265 aaPredicted RBP9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 ZNF134P52741 427 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 KRTAP10-11P60412 298 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 HTD2P86397 168 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 GPR50Q13585 617 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 KIR2DS1Q14954 304 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 MORN2Q502X0 79 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 DEFB121Q5J5C9 76 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 CXorf66Q5JRM2 361 aaPredicted RBP9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 ETV3LQ6ZN32 361 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 NANOGP1Q8N7R0 232 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 ZFP41Q8N8Y5 198 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 OR4K15Q8NH41 348 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 FBLIM1Q8WUP2 373 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 Q96M66 194 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 OR2S2Q9NQN1 319 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 JPT1Q9UK76 154 aa9.59□□□□□ -0.87
GTF3C1-204ENST00000564664 IGHV3-43A0A0B4J1X8 118 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 IGHV3-72A0A0B4J1Y9 119 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 A0A1W2PPK0 400 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 MAGEA13PA6NCF6 341 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 LINC01548A6NM66 108 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 ANKRD65E5RJM6 399 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 CCL24O00175 119 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 YPEL1O60688 119 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 PDCD6O75340 191 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 IGF1P05019 195 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 IGHV3-43DP0DP04 118 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 SOX6P35712 828 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 VHLP40337 213 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 VAX1Q5SQQ9 334 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 C8orf86Q6ZUL3 223 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 FAM71E2Q8N5Q1 922 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 OR8U1Q8NH10 309 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 PHYHIPQ92561 330 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 NEDD4LQ96PU5 975 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 YPEL2Q96QA6 119 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 BANF2Q9H503 90 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 DCLRE1BQ9H816 532 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 TAF9BQ9HBM6 251 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 LINC00527Q9UJ94 153 aa9.58□□□□□ -0.88
GTF3C1-204ENST00000564664 WI2-2373I1.2A0A1W2PRP0 233 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 IGHG4P01861 327 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 RCC1P18754 421 aaPredicted RBP9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 VDAC1P21796 283 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 RANBP1P43487 201 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 GLT8D1Q68CQ7 371 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 SIGIRRQ6IA17 410 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 LAIR2Q6ISS4 152 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 PRR18Q8N4B5 295 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 BPIFB6Q8NFQ5 453 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 OR1L1Q8NH94 360 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 UBALD1Q8TB05 177 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 GALMQ96C23 342 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 MND1Q9BWT6 205 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 VCXQ9H320 206 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 GHITMQ9H3K2 345 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 FKBP14Q9NWM8 211 aa9.57□□□□□ -0.88
GTF3C1-204ENST00000564664 PNMA8CA0A1B0GUJ8 204 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 UBE2QL1A1L167 161 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 ZNF736B4DX44 427 aaPredicted RBP9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 CASQ2O14958 399 aaPredicted RBP9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 SLC31A2O15432 143 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 BPNT1O95861 308 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 CD37P11049 281 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 HOXD3P31249 432 aaPredicted RBP9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 F2RL1P55085 397 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 DGCR2P98153 550 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 CFHR3Q02985 330 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 RCN1Q15293 331 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 ACSM3Q53FZ2 586 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 C1orf100Q5SVJ3 147 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 OGFRL1Q5TC84 451 aaPredicted RBP9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 FAM71F2Q6NXP2 309 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 AHSA2Q719I0 299 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 OR10V1Q8NGI7 309 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 KCNG3Q8TAE7 436 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 MRPL30Q8TCC3 161 aaKnown RBP9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 TFAP2CQ92754 450 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 RAX2Q96IS3 184 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 B9D2Q9BPU9 175 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 ABHD14AQ9BUJ0 271 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 RIMS4Q9H426 269 aaPredicted RBP9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 ABRACLQ9P1F3 81 aa9.56□□□□□ -0.88
GTF3C1-204ENST00000564664 RPLP1P05386 114 aaKnown RBP9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 CDK1P06493 297 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 GNAO1P09471 354 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 SRMP19623 302 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 PSMB8P28062 276 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 LSAMPQ13449 338 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 C6orf141Q5SZD1 244 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 FAM53AQ6NSI3 398 aaPredicted RBP9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 LCNL1Q6ZST4 164 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 C18orf65Q6ZTR6 163 aa9.55□□□□□ -0.88
GTF3C1-204ENST00000564664 OR5M8Q8NGP6 311 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms