RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 MADCAM1Q13477 382 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 SLC9A3R2Q15599 337 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 LRRC75BQ2VPJ9 315 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 ZNF260Q3ZCT1 412 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 CDNFQ49AH0 187 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 DTX3Q8N9I9 347 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 OR4A4PQ8NGN8 299 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 OR5H6Q8NGV6 325 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 NDNFQ8TB73 568 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 RAB18Q9NP72 206 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 OR2S2Q9NQN1 319 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 CCDC59Q9P031 241 aaKnown RBP13.53□□□□□ -0.24
RNF40-206ENST00000564260 PSG11Q9UQ72 335 aa13.53□□□□□ -0.24
RNF40-206ENST00000564260 TRAV39A0A0B4J263 110 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 TRDCB7Z8K6 153 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 HOXA3O43365 443 aaPredicted RBP13.52□□□□□ -0.25
RNF40-206ENST00000564260 TXNL1O43396 289 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 LPLP06858 475 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 FCGR3AP08637 254 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 RAB7AP51149 207 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 ZNF137PP52743 207 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 ARFRP1Q13795 201 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 SLC25A48Q6ZT89 311 aaKnown RBP13.52□□□□□ -0.25
RNF40-206ENST00000564260 SAMD12Q8N8I0 201 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 OR10X1Q8NGY0 326 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 ISOC1Q96CN7 298 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 TOLLIPQ9H0E2 274 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 ESM1Q9NQ30 184 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 NDUFA13Q9P0J0 144 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 PITPNC1Q9UKF7 332 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 VPREB3Q9UKI3 123 aa13.52□□□□□ -0.25
RNF40-206ENST00000564260 A0A1W2PRD5 423 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 A0A1W2PRF3 423 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 A0A1W2PRM7 423 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 LY6LH3BQJ8 138 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 CTXN2P0C2S0 81 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 ZBTB25P24278 435 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 BRS3P32247 399 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 MNDAP41218 407 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 CBX5P45973 191 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 GNG2P59768 71 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 PRB3Q04118 309 aaPredicted RBP13.51□□□□□ -0.25
RNF40-206ENST00000564260 MORN2Q502X0 79 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 C16orf87Q6PH81 154 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 OR8H3Q8N146 312 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 OR1L1Q8NH94 360 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 C15orf40Q8WUR7 153 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 EDARADDQ8WWZ3 215 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 ABCB10Q9NRK6 738 aa13.51□□□□□ -0.25
RNF40-206ENST00000564260 MDFIC2A0A1B0GVS7 189 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 SMIM31A0A1B0GVY4 71 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 H3BMQ9 156 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 SSX2Q16385 188 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 TPTE2P1Q5T6R2 138 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 FAM71F2Q6NXP2 309 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 LHFPL4Q7Z7J7 247 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 PRR18Q8N4B5 295 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 ZNF439Q8NDP4 499 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 SETD6Q8TBK2 473 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 RPEQ96AT9 228 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 SSX3Q99909 188 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 CABLES2Q9BTV7 478 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 RABL2AQ9UBK7 228 aaPredicted RBP13.5□□□□□ -0.25
RNF40-206ENST00000564260 RABL2BQ9UNT1 228 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 CEPT1Q9Y6K0 416 aa13.5□□□□□ -0.25
RNF40-206ENST00000564260 FABP7O15540 132 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 ZNF816Q0VGE8 651 aaPredicted RBP13.49□□□□□ -0.25
RNF40-206ENST00000564260 TMEM69Q5SWH9 247 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 OLFML2AQ68BL7 652 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 BAIAP2L2Q6UXY1 529 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 Q6ZPA2 131 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 OR2AK2Q8NG84 335 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 DYNC2LI1Q8TCX1 351 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 HDHD3Q9BSH5 251 aaPredicted RBP13.49□□□□□ -0.25
RNF40-206ENST00000564260 ABHD14AQ9BUJ0 271 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 AUNIPQ9H7T9 357 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 COMMD3Q9UBI1 195 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 ADAM30Q9UKF2 790 aa13.49□□□□□ -0.25
RNF40-206ENST00000564260 SOX21Q9Y651 276 aaPredicted RBP13.49□□□□□ -0.25
RNF40-206ENST00000564260 A0A075B6Q4 140 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 TRAV18A0A075B6X5 111 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 TMEM235A6NFC5 223 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 IGHV4-59P01825 116 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 SPCS2Q15005 226 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 LTC4SQ16873 150 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 LDLRAD2Q5SZI1 272 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 C16orf82Q7Z2V1 217 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 THNSL2Q86YJ6 484 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 IL1F10Q8WWZ1 152 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 TOMM40LQ969M1 308 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 RBM38Q9H0Z9 239 aaKnown RBP13.48□□□□□ -0.25
RNF40-206ENST00000564260 PIPOXQ9P0Z9 390 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 RSL24D1Q9UHA3 163 aaKnown RBP13.48□□□□□ -0.25
RNF40-206ENST00000564260 KIAA2026Q5HYC2 2103 aa13.48□□□□□ -0.25
RNF40-206ENST00000564260 FAM172BPA6NC97 362 aa13.47□□□□□ -0.25
RNF40-206ENST00000564260 H3BUX3 64 aa13.47□□□□□ -0.25
RNF40-206ENST00000564260 HSPA12AO43301 675 aa13.47□□□□□ -0.25
RNF40-206ENST00000564260 GAPDHP04406 335 aaKnown RBP13.47□□□□□ -0.25
RNF40-206ENST00000564260 GNG10P50151 68 aa13.47□□□□□ -0.25
RNF40-206ENST00000564260 HABP2Q14520 560 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms