RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 CLEC18AA5D8T8 446 aa9□□□□□ -0.97
RNF40-204ENST00000563683 DVL1O14640 695 aa9□□□□□ -0.97
RNF40-204ENST00000563683 CA11O75493 328 aa9□□□□□ -0.97
RNF40-204ENST00000563683 FADS6Q8N9I5 356 aa9□□□□□ -0.97
RNF40-204ENST00000563683 CLEC18CQ8NCF0 446 aa9□□□□□ -0.97
RNF40-204ENST00000563683 GALMQ96C23 342 aa9□□□□□ -0.97
RNF40-204ENST00000563683 MISP3Q96FF7 219 aa9□□□□□ -0.97
RNF40-204ENST00000563683 GCM1Q9NP62 436 aa9□□□□□ -0.97
RNF40-204ENST00000563683 WSB1Q9Y6I7 421 aa9□□□□□ -0.97
RNF40-204ENST00000563683 MUC22E2RYF6 1773 aaPredicted RBP9□□□□□ -0.97
RNF40-204ENST00000563683 IGHV3-43A0A0B4J1X8 118 aa9□□□□□ -0.97
RNF40-204ENST00000563683 PHOX2AO14813 284 aa9□□□□□ -0.97
RNF40-204ENST00000563683 RRP8O43159 456 aaKnown RBP9□□□□□ -0.97
RNF40-204ENST00000563683 SYNGR1O43759 233 aa9□□□□□ -0.97
RNF40-204ENST00000563683 KLF7O75840 302 aaPredicted RBP9□□□□□ -0.97
RNF40-204ENST00000563683 SRP19P09132 144 aaKnown RBP9□□□□□ -0.97
RNF40-204ENST00000563683 IGHV3-43DP0DP04 118 aa9□□□□□ -0.97
RNF40-204ENST00000563683 SOX8P57073 446 aa9□□□□□ -0.97
RNF40-204ENST00000563683 SLC25A53Q5H9E4 307 aa9□□□□□ -0.97
RNF40-204ENST00000563683 TGIF2LXQ8IUE1 241 aa9□□□□□ -0.97
RNF40-204ENST00000563683 BEND2Q8NDZ0 799 aa9□□□□□ -0.97
RNF40-204ENST00000563683 OR4A16Q8NH70 328 aa9□□□□□ -0.97
RNF40-204ENST00000563683 SARAFQ96BY9 339 aa9□□□□□ -0.97
RNF40-204ENST00000563683 ADGRG7Q96K78 797 aa9□□□□□ -0.97
RNF40-204ENST00000563683 LYZL4Q96KX0 146 aa9□□□□□ -0.97
RNF40-204ENST00000563683 COL4A2P08572 1712 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 A0A1B0GWJ7 208 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 TRDCB7Z8K6 153 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 VDAC1P21796 283 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 RND3P61587 244 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 ZNF154Q13106 437 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 ATP1A1-AS1Q5TC04 95 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 GFI1BQ5VTD9 330 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 FAM89BQ8N5H3 189 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 TMEM54Q969K7 222 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 NEU1Q99519 415 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 GPR87Q9BY21 358 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 LIN7CQ9NUP9 197 aaKnown RBP8.99□□□□□ -0.97
RNF40-204ENST00000563683 PKDREJQ9NTG1 2253 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 UNC80Q8N2C7 3258 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 OR3A1P47881 315 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 DYNLT3P51808 116 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 ERVFRD-1P60508 538 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 PPP1CBP62140 327 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 HLA-DRB3P79483 266 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 OR8B8Q15620 311 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 ZNF718Q3SXZ3 478 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 ZNF385CQ66K41 422 aaPredicted RBP8.99□□□□□ -0.97
RNF40-204ENST00000563683 CALHM1Q8IU99 346 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 ZADH2Q8N4Q0 377 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 OR52M1Q8NGK5 317 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 BSCL2Q96G97 398 aaPredicted RBP8.99□□□□□ -0.97
RNF40-204ENST00000563683 NDUFAF3Q9BU61 184 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 OR2J1Q9GZK6 312 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 LRP5LA4QPB2 252 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 RAB4AP20338 218 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 EIF3IQ13347 325 aaKnown RBP8.99□□□□□ -0.97
RNF40-204ENST00000563683 SPINK9Q5DT21 86 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 PRAMEF5Q5TYX0 476 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 PRAMEF6Q5VXH4 476 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 ZNF787Q6DD87 383 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 RPUSD4Q96CM3 377 aaKnown RBP8.99□□□□□ -0.97
RNF40-204ENST00000563683 C1orf147Q96MC9 270 aaPredicted RBP8.99□□□□□ -0.97
RNF40-204ENST00000563683 SIGLEC12Q96PQ1 595 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 TAAR3PQ9P1P4 343 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 PRSS50Q9UI38 385 aa8.99□□□□□ -0.97
RNF40-204ENST00000563683 CADP27708 2225 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 IGKV1D-8A0A087WSZ0 117 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 H0YL77 283 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 CLDN34H7C241 214 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 AGFG2O95081 481 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 SP1P08047 785 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 CYC1P08574 325 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 PTGDSP41222 190 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 EWSR1Q01844 656 aaKnown RBP eCLIP8.98□□□□□ -0.97
RNF40-204ENST00000563683 PNRC1Q12796 327 aaPredicted RBP8.98□□□□□ -0.97
RNF40-204ENST00000563683 JOSD1Q15040 202 aaPredicted RBP8.98□□□□□ -0.97
RNF40-204ENST00000563683 C4orf17Q53FE4 359 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 CXorf66Q5JRM2 361 aaPredicted RBP8.98□□□□□ -0.97
RNF40-204ENST00000563683 MDP1Q86V88 176 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 MPC1Q9Y5U8 109 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 OR5B21A6NL26 309 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 SCAF4O95104 1147 aaKnown RBP8.98□□□□□ -0.97
RNF40-204ENST00000563683 RELQ04864 619 aaPredicted RBP8.98□□□□□ -0.97
RNF40-204ENST00000563683 MZT1Q08AG7 82 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 TRIP6Q15654 476 aaKnown RBP8.98□□□□□ -0.97
RNF40-204ENST00000563683 ZNF506Q5JVG8 444 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 OR5A2Q8NGI9 324 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 MRGPRDQ8TDS7 321 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 LIPGQ9Y5X9 500 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 UBE2L5PA0A1B0GUS4 154 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 CRYAAP02489 173 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 PAX1P15863 534 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 NOVA1P51513 510 aaKnown RBP8.98□□□□□ -0.97
RNF40-204ENST00000563683 NUTF2P61970 127 aaKnown RBP8.98□□□□□ -0.97
RNF40-204ENST00000563683 RUNX1Q01196 453 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 RAB31Q13636 194 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 IZUMO4Q1ZYL8 232 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 RIPPLY2Q5TAB7 128 aa8.98□□□□□ -0.97
RNF40-204ENST00000563683 NECAP1Q8NC96 275 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms