RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 MYL12AP19105 171 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 PSMB8P28062 276 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 ZNF137PP52743 207 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 CT45A1Q5HYN5 189 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 TMPRSS11AQ6ZMR5 421 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 SLC25A48Q6ZT89 311 aaKnown RBP13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 LINC00596Q86U02 117 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 OR13C5Q8NGS8 318 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 CT45A3Q8NHU0 189 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 RASL11BQ9BPW5 248 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 GON7Q9BXV9 100 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 TMEM138Q9NPI0 162 aa13.11□□□□□ -0.31
HDGFL3-203ENST00000563404 C12orf77C9JDV5 145 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 AIPO00170 330 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 CD2P06729 351 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 IGFBP3P17936 291 aaPredicted RBP13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 IL3RAP26951 378 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 BDKRB2P30411 391 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 ETV1P50549 477 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 KIAA0141Q14154 515 aaPredicted RBP13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 MPV17LQ2QL34 196 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 KCTD21Q4G0X4 260 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 OR2G6Q5TZ20 316 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 RPL22L1Q6P5R6 122 aaKnown RBP13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 AHSA2Q719I0 299 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 PRSS48Q7RTY5 328 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 MYOZ3Q8TDC0 251 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 C4orf3Q8WVX3 66 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 KCTD7Q96MP8 289 aa13.1□□□□□ -0.31
HDGFL3-203ENST00000563404 RGS10O43665 173 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 LALBAP00709 142 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 IGF1P05019 195 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 VDAC1P21796 283 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 SOX6P35712 828 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 Q3ZCU0 254 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 SLC22A6Q4U2R8 563 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 CCDC58Q4VC31 144 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 SYT6Q5T7P8 510 aaPredicted RBP13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 ASPHD1Q5U4P2 390 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 C5orf24Q7Z6I8 188 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 OR11H1Q8NG94 326 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 OR8H1Q8NGG4 311 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 OR10V1Q8NGI7 309 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 OR1L1Q8NH94 360 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 NEK7Q8TDX7 302 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 KLK15Q9H2R5 256 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 GNB4Q9HAV0 340 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 RCC2Q9P258 522 aaKnown RBP13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 ERGIC3Q9Y282 383 aa13.09□□□□□ -0.31
HDGFL3-203ENST00000563404 OGG1O15527 345 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 HBZP02008 142 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 PPP3R1P63098 170 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 IRF3Q14653 427 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 ZNF260Q3ZCT1 412 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 GAPTQ8N292 157 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 NANOGP1Q8N7R0 232 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 ZNF485Q8NCK3 441 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 OR4K15Q8NH41 348 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 RITA1Q96K30 269 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 PAK1IP1Q9NWT1 392 aaPredicted RBP13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 ZNF580Q9UK33 172 aa13.08□□□□□ -0.32
HDGFL3-203ENST00000563404 TRAV8-7A0A075B6U6 113 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 TRBV5-5A0A0J9YX44 114 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 ZNF780AO75290 641 aaPredicted RBP13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 TNFAIP8O95379 198 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 SLC2A2P11168 524 aaPredicted RBP13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 GTF2F2P13984 249 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 PPIFP30405 207 aaKnown RBP13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 LSAMPQ13449 338 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 PRR18Q8N4B5 295 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 SMIM19Q96E16 107 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 S100A13Q99584 98 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 LYSTQ99698 3801 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 BABAM2Q9NXR7 383 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 ETAA1Q9NY74 926 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 GNG12Q9UBI6 72 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 ZNF107Q9UII5 783 aaPredicted RBP13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 TRAPPC2LQ9UL33 140 aa13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 ZNF256Q9Y2P7 627 aaPredicted RBP13.07□□□□□ -0.32
HDGFL3-203ENST00000563404 G3V318 75 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 I3L521 148 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 SPINT2O43291 252 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 TXNL1O43396 289 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 GPX5O75715 221 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 RCC1P18754 421 aaPredicted RBP13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 CNTFRP26992 372 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 RPS11P62280 158 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 GNB1P62873 340 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 MUL1Q969V5 352 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 MND1Q9BWT6 205 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 CLEC2DQ9UHP7 191 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 WSB1Q9Y6I7 421 aa13.06□□□□□ -0.32
HDGFL3-203ENST00000563404 MCRIP1C9JLW8 97 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 LANCL1O43813 399 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 WNT4P56705 351 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 TAS2R43P59537 309 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 GNMTQ14749 295 aa13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 DMKNQ6E0U4 476 aaPredicted RBP13.05□□□□□ -0.32
HDGFL3-203ENST00000563404 RAB12Q6IQ22 244 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms