RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 MMP24Q9Y5R2 645 aa11.11□□□□□ -0.63
USB1-207ENST00000563149 LINC00587B1AMM8 73 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 IFNA1P01562 189 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 IGLV2-14P01704 120 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 JMJD7P0C870 316 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 RND2P52198 227 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 TMEM267Q0VDI3 215 aaPredicted RBP11.1□□□□□ -0.63
USB1-207ENST00000563149 TESK1Q15569 626 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 ZNF674Q2M3X9 581 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 FAM90A2PQ658T7 463 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 ZNF787Q6DD87 383 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 Q6ZRM9 215 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 NUFIP2Q7Z417 695 aaKnown RBP11.1□□□□□ -0.63
USB1-207ENST00000563149 LURAP1LQ8IV03 231 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 ZBTB34Q8NCN2 500 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 BCL2L2Q92843 193 aaPredicted RBP11.1□□□□□ -0.63
USB1-207ENST00000563149 RPRMQ9NS64 109 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 MBNL3Q9NUK0 354 aaKnown RBP11.1□□□□□ -0.63
USB1-207ENST00000563149 OR1A1Q9P1Q5 309 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 MIOXQ9UGB7 285 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 TIMM9Q9Y5J7 89 aa11.1□□□□□ -0.63
USB1-207ENST00000563149 ARID1AO14497 2285 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 FAM166BA8MTA8 275 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 CYB5R3P00387 301 aaPredicted RBP11.09□□□□□ -0.63
USB1-207ENST00000563149 IGKV1-5P01602 117 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 CXCL1P09341 107 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 FBP1P09467 338 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 CA6P23280 308 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 ERVK11-1P61568 191 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 ZXDAP98168 799 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 OR2T2Q6IF00 324 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 MRGPRGQ86SM5 289 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 C17orf78Q8N4C9 275 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 IL1F10Q8WWZ1 152 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 CTDSP1Q9GZU7 261 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 TMEM9BQ9NQ34 198 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 GNG13Q9P2W3 67 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 TRAPPC2LQ9UL33 140 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 KLF13Q9Y2Y9 288 aaPredicted RBP11.09□□□□□ -0.63
USB1-207ENST00000563149 RBM7Q9Y580 266 aaKnown RBP11.09□□□□□ -0.63
USB1-207ENST00000563149 TRIOO75962 3097 aa11.09□□□□□ -0.63
USB1-207ENST00000563149 ELOA3CA0A087WX78 387 aaPredicted RBP11.08□□□□□ -0.64
USB1-207ENST00000563149 H3BP45 60 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 CLDN34H7C241 214 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 SLC33A1O00400 549 aaPredicted RBP11.08□□□□□ -0.64
USB1-207ENST00000563149 LILRA1O75019 489 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 ERVFRD-1P60508 538 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 TBC1D28Q2M2D7 210 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 ZNF585BQ52M93 769 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 TMEM41BQ5BJD5 291 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 NCMAPQ5T1S8 102 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 LILRB2Q8N423 598 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 RSG1Q9BU20 258 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 HES7Q9BYE0 225 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 WDR61Q9GZS3 305 aaKnown RBP11.08□□□□□ -0.64
USB1-207ENST00000563149 DOK5Q9P104 306 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 VAX2Q9UIW0 290 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 EYSQ5T1H1 3165 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 SEC14L6B5MCN3 397 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 C9orf172C9J069 976 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 SH2D1BO14796 132 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 ZNHIT1O43257 154 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 RHBDL1O75783 438 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 OR2H2O95918 312 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 IGHV2-70P01814 119 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 METTL15P1P0C7V9 234 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 S100A2P29034 98 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 NDUFA6P56556 154 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 RAB11AP62491 216 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 MRPL49Q13405 166 aaKnown RBP11.08□□□□□ -0.64
USB1-207ENST00000563149 ZNF146Q15072 292 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 ATP6V1FQ16864 119 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 DCAF10Q5QP82 559 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 FBXW9Q5XUX1 488 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 ZNF343Q6P1L6 599 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 P4HA3Q7Z4N8 544 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 CENPVQ7Z7K6 275 aaPredicted RBP11.08□□□□□ -0.64
USB1-207ENST00000563149 C1orf87Q8N0U7 546 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 CA5BP1Q8WTZ4 195 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 SDF2L1Q9HCN8 221 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 GAR1Q9NY12 217 aaKnown RBP11.08□□□□□ -0.64
USB1-207ENST00000563149 PRSS50Q9UI38 385 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 PPP1R3CQ9UQK1 317 aa11.08□□□□□ -0.64
USB1-207ENST00000563149 KLRC4-KLRK1H3BQV0 150 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 IL18BPO95998 194 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 SP1P08047 785 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 IAPPP10997 89 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 ARL16Q0P5N6 197 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 SLC10A1Q14973 349 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 MSMO1Q15800 293 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 ZNF726P1Q15940 193 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 MDP1Q86V88 176 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 C1orf210Q8IVY1 113 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 OR14J1Q9UGF5 321 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 DMRT1Q9Y5R6 373 aa11.07□□□□□ -0.64
USB1-207ENST00000563149 ARGFXA6NJG6 315 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 TMEM210A6NLX4 147 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 ZFP92A6NM28 416 aa11.06□□□□□ -0.64
USB1-207ENST00000563149 CYB5BO43169 146 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms