RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 ERVK13-1Q9NX77 482 aa12.2□□□□□ -0.46
HERPUD1-205ENST00000562914 TAS2R4Q9NYW5 299 aa12.2□□□□□ -0.46
HERPUD1-205ENST00000562914 A8MZ25 164 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 C12orf77C9JDV5 145 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 MCRIP1C9JLW8 97 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 G3V318 75 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 SLC31A2O15432 143 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 ALPLP05186 524 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 SERPINA2P20848 420 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 ZNF134P52741 427 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 ACTBP60709 375 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 SYT6Q5T7P8 510 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 DDI2Q5TDH0 399 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 C1orf146Q5VVC0 180 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 LIN54Q6MZP7 749 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 LYPD6Q86Y78 171 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 GAPTQ8N292 157 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 DLX4Q92988 240 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 PARP11Q9NR21 331 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 ZNF581Q9P0T4 197 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 RCC2Q9P258 522 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 KIAA1456Q9P272 454 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
HERPUD1-205ENST00000562914 IGHV7-81A0A0B4J1V7 117 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 E9PI62 339 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 NBR2O15453 112 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 HBZP02008 142 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 LGALS1P09382 135 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 BDKRB2P30411 391 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 SOX2P48431 317 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 CRIP2P52943 208 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 C5orf64Q2M2E5 130 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 PYHIN1Q6K0P9 492 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 NPBQ8NG41 125 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 UBALD1Q8TB05 177 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 FLYWCH2Q96CP2 140 aaKnown RBP12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 OR5B12Q96R08 314 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 OR4C12Q96R67 309 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 TOLLIPQ9H0E2 274 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 ETAA1Q9NY74 926 aa12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 NKX1-2Q9UD57 310 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-205ENST00000562914 FAM90A7PA6NKC0 464 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 SAC3D1A6NKF1 404 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 FAM90A23PA8MXZ1 464 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 GLAP06280 429 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 VEGFCP49767 419 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 PITPNAQ00169 270 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 TMEM267Q0VDI3 215 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 SLC22A6Q4U2R8 563 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 MORN2Q502X0 79 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 LY6G6FQ5SQ64 297 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 ZNF660Q6AZW8 331 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 RPL22L1Q6P5R6 122 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 OR10V1Q8NGI7 309 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 ABHD14AQ9BUJ0 271 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 ANKRD60Q9BZ19 345 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 OR2S2Q9NQN1 319 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 JPT1Q9UK76 154 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 RNF150Q9ULK6 438 aa12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 FOXA2Q9Y261 457 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-205ENST00000562914 SACSQ9NZJ4 4579 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 MAGEA13PA6NCF6 341 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 HSPA12AO43301 675 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 SC5DO75845 299 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 RGS11O94810 467 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 NDUFA3O95167 84 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 BLVRBP30043 206 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 RIPK1Q13546 671 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 FAM53AQ6NSI3 398 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 PRR18Q8N4B5 295 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 RGP1Q92546 391 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 ELOVL1Q9BW60 279 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 EDA2RQ9HAV5 297 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 TPSG1Q9NRR2 321 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 KCNIP1Q9NZI2 227 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 CKLFQ9UBR5 152 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 RPL36Q9Y3U8 105 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
HERPUD1-205ENST00000562914 A0A1W2PN81 502 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 TRIM64CA6NLI5 447 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 EBAG9O00559 213 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 HSPB1P04792 205 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 GABRB1P18505 474 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 CD40LGP29965 261 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 CHRNA7P36544 502 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 ALDH3A2P51648 485 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 SLURP1P55000 103 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 HTD2P86397 168 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 C19orf54Q5BKX5 351 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 RAB12Q6IQ22 244 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 FAM71F2Q6NXP2 309 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 OR4K15Q8NH41 348 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 ARPC1AQ92747 370 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 ZNF184Q99676 751 aaPredicted RBP12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 NABP2Q9BQ15 211 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 TAF9BQ9HBM6 251 aa12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 MBNL3Q9NUK0 354 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-205ENST00000562914 STUB1Q9UNE7 303 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms