RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	UCP3	P55916	312 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	FXYD4	P59646	89 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	HERV-K104	P61576	105 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	SEC61A1	P61619	476 aa	Known RBP	6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	SNRPD2	P62316	118 aa	Known RBP	6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	AES	Q08117	197 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	HMGN3	Q15651	99 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	C2orf68	Q2NKX9	166 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	TMEM128	Q5BJH2	165 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	FAM201A	Q5SY85	155 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	TEX36	Q5VZQ5	186 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	SLC38A6	Q8IZM9	456 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	ZCCHC24	Q8N2G6	241 aa	Known RBP	6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	MUC15	Q8N387	334 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	C12orf45	Q8N5I9	185 aa	Predicted RBP	6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	ASCC1	Q8N9N2	400 aa	Known RBP	6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	OR2AK2	Q8NG84	335 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	OR5T2	Q8NGG2	359 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	ZFAND1	Q8TCF1	268 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	MITD1	Q8WV92	249 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	TOMM40L	Q969M1	308 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	PERP	Q96FX8	193 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	SDSL	Q96GA7	329 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	SNX22	Q96L94	193 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	RSRP1	Q9BUV0	290 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	TRAF4	Q9BUZ4	470 aa	Predicted RBP	6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	ZNF436	Q9C0F3	470 aa	Predicted RBP	6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	MS4A5	Q9H3V2	200 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	DCAF16	Q9NXF7	216 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	PCDHB10	Q9UN67	800 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	MEGF8	Q7Z7M0	2845 aa		6.26	□□□□□ -1.41
TPM1-231	ENST00000561395	TRAV39	A0A0B4J263	110 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	FAM172BP	A6NC97	362 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	OOEP	A6NGQ2	149 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	CRYM-AS1	A6NIL9	109 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	SMLR1	H3BR10	107 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	TMEM178B	H3BS89	294 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395		K7N7A8	449 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	LGALS8	O00214	317 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	GOSR2	O14653	212 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	MGST3	O14880	152 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	SFT2D2	O95562	160 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	DUS4L	O95620	317 aa	Known RBP	6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	C1QB	P02746	253 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	GIP	P09681	153 aa	Predicted RBP	6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	MUC1	P15941	1255 aa	Predicted RBP	6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	CD34	P28906	385 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	GLIPR1	P48060	266 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	NKX2-5	P52952	324 aa	Predicted RBP	6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	SUPT4H1	P63272	117 aa	Known RBP	6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	IL13RA1	P78552	427 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	KRTAP24-1	Q3LI83	254 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	KRBOX4	Q5JUW0	171 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	C6orf183	Q5T699	404 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	C11orf71	Q6IPW1	123 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	TRAT1	Q6PIZ9	186 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	NLRC3	Q7RTR2	1065 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	NOXA1	Q86UR1	476 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	H1FOO	Q8IZA3	346 aa	Predicted RBP	6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	C1orf87	Q8N0U7	546 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	ZNF561	Q8N587	486 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	OR10J5	Q8NHC4	309 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	PPP1R35	Q8TAP8	253 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	ASB13	Q8WXK3	278 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	ZNF486	Q96H40	463 aa	Predicted RBP	6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	KIRREL1	Q96J84	757 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	GAFA1	Q96PS6	74 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	PHB2	Q99623	299 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	TAF9B	Q9HBM6	251 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	TMEM106B	Q9NUM4	274 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	KCNIP1	Q9NZI2	227 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	PIPOX	Q9P0Z9	390 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	OR1A1	Q9P1Q5	309 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395	DSCAML1	Q8TD84	2053 aa		6.25	□□□□□ -1.41
TPM1-231	ENST00000561395		A0A0B4J2A0	478 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	IGKV1D-13	A0A0B4J2D9	117 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	IGHV1-69-2	A0A0G2JMI3	117 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	ODAM	A1E959	279 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	NKX6-3	A6NJ46	265 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	DBX1	A6NMT0	343 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	C12orf77	C9JDV5	145 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	SIGLEC5	O15389	551 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	SLC22A5	O76082	557 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	OR2A4	O95047	310 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	HBZ	P02008	142 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	GYPA	P02724	150 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	IGKV1-13	P0DP09	117 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	SELL	P14151	372 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	ATF4	P18848	351 aa	Predicted RBP	6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	ERP29	P30040	261 aa	Known RBP	6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	GZMK	P49863	264 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	P2RX3	P56373	397 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	H2BFS	P57053	126 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	PIGP	P57054	158 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	RAP2B	P61225	183 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	RND3	P61587	244 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	EDDM3A	Q14507	147 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	SLC9A3R2	Q15599	337 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	ANKRD55	Q3KP44	614 aa		6.24	□□□□□ -1.41
TPM1-231	ENST00000561395	ABCA11P	Q4W5N1	156 aa		6.24	□□□□□ -1.41

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