RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	GAPT	Q8N292	157 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	STX19	Q8N4C7	294 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304		Q8N6K4	173 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	DTX3	Q8N9I9	347 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	OR4F17	Q8NGA8	305 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	OR10A7	Q8NGE5	316 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	OR10V1	Q8NGI7	309 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	OR10X1	Q8NGY0	326 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	OR4K15	Q8NH41	348 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	OR1L1	Q8NH94	360 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	ARL11	Q969Q4	196 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	ST6GALNAC6	Q969X2	333 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	AKR1E2	Q96JD6	320 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	OR4F4	Q96R69	305 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	S100A13	Q99584	98 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	SELENOI	Q9C0D9	397 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	CKLF	Q9UBR5	152 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	DNAH7	Q8WXX0	4024 aa		5.85	□□□□□ -1.47
ZEB1-223	ENST00000561304	TCRBV4S1A1T	A0A5B7	111 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	UBE2QL1	A1L167	161 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	ORC5	O43913	435 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	ZNF780A	O75290	641 aa	Predicted RBP	5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	CRTAP	O75718	401 aa	Predicted RBP	5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	SC5D	O75845	299 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	HBZ	P02008	142 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	CD1A	P06126	327 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	FAM106CP	P0CH98	169 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	RAB7A	P51149	207 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	EMX1	Q04741	257 aa	Predicted RBP	5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	GABPB1	Q06547	395 aa	Predicted RBP	5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	MED21	Q13503	144 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	IRF3	Q14653	427 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	ANKRD39	Q53RE8	183 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	KHDC1L	Q5JSQ8	128 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	C6orf141	Q5SZD1	244 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	SYT6	Q5T7P8	510 aa	Predicted RBP	5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	UNQ9370/PRO34162	Q6UXP9	181 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	MOB3B	Q86TA1	216 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	IZUMO1	Q8IYV9	350 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	OR8H3	Q8N146	312 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	PRR18	Q8N4B5	295 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	LINC00311	Q8N616	119 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	OR52M1	Q8NGK5	317 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	MRPL30	Q8TCC3	161 aa	Known RBP	5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	CHAC2	Q8WUX2	184 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	GFI1	Q99684	422 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	TMED9	Q9BVK6	235 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	PCDHB16	Q9NRJ7	776 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	ETAA1	Q9NY74	926 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	TSSC4	Q9Y5U2	329 aa	Predicted RBP	5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304	PEX16	Q9Y5Y5	336 aa		5.84	□□□□□ -1.47
ZEB1-223	ENST00000561304		A0A0A6YYD4	124 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	PSMB11	A5LHX3	300 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	MCRIP1	C9JLW8	97 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	CCRL2	O00421	344 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	MPIG6B	O95866	241 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	PF4V1	P10720	104 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	GZMH	P20718	246 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	ZNF137P	P52743	207 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	SLC35A2	P78381	396 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	UNC119	Q13432	240 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	EBI3	Q14213	229 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	GPR176	Q14439	515 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	ACSM3	Q53FZ2	586 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	TM4SF20	Q53R12	229 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	CT45A1	Q5HYN5	189 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	RBM48	Q5RL73	367 aa	Known RBP	5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	FOXB2	Q5VYV0	432 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	SLC16A12	Q6ZSM3	486 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	SLC25A48	Q6ZT89	311 aa	Known RBP	5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	CDH26	Q8IXH8	852 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	ODF3L1	Q8IXM7	274 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	NKAIN3	Q8N8D7	197 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	C8orf31	Q8N9H6	132 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304		Q8N9W7	124 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	WFDC9	Q8NEX5	89 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	OR4X2	Q8NGF9	303 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	CT45A3	Q8NHU0	189 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	SULT4A1	Q9BR01	284 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	NICN1	Q9BSH3	213 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	MND1	Q9BWT6	205 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	PLSCR3	Q9NRY6	295 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	TRAPPC2L	Q9UL33	140 aa		5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.83	□□□□□ -1.48
ZEB1-223	ENST00000561304	FAM90A10P	A6NDY2	464 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	FAM90A7P	A6NKC0	464 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	FAM90A23P	A8MXZ1	464 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	PTGES3L	E9PB15	166 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304		M0QZK8	103 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	FGF16	O43320	207 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	PDCD6	O75340	191 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	IGHG2	P01859	326 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	GAPDH	P04406	335 aa	Known RBP	5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	CHAT	P28329	748 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	PPP1CC	P36873	323 aa	Known RBP	5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	F2RL1	P55085	397 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	KRTAP10-11	P60412	298 aa		5.82	□□□□□ -1.48
ZEB1-223	ENST00000561304	RPL23A	P62750	156 aa	Known RBP	5.82	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms