RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 BLVRBP30043 206 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-204ENST00000561065 MRPS15P82914 257 aaKnown RBP12.72□□□□□ -0.37
LMX1B-204ENST00000561065 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 FAM53AQ6NSI3 398 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-204ENST00000561065 GAPTQ8N292 157 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 OR56B1Q8NGI3 324 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 GALMQ96C23 342 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 RBM14Q96PK6 669 aaKnown RBP12.72□□□□□ -0.37
LMX1B-204ENST00000561065 TM2D1Q9BX74 207 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 CHMP1AQ9HD42 196 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-204ENST00000561065 VCX3AQ9NNX9 186 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 GFOD1Q9NXC2 390 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 RAB22AQ9UL26 194 aa12.72□□□□□ -0.37
LMX1B-204ENST00000561065 TMEM14DPA8MWL7 114 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 TXNL1O43396 289 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 GNG10P50151 68 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 ABCA11PQ4W5N1 156 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 ZNF773Q6PK81 442 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 CD200R1LQ6Q8B3 271 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 C10orf99Q6UWK7 81 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 MOB1BQ7L9L4 216 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 NDUFA11Q86Y39 141 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 LINC00311Q8N616 119 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 OR4K15Q8NH41 348 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 UBALD1Q8TB05 177 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 FAM3DQ96BQ1 224 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 CENPOQ9BU64 300 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 TAF9BQ9HBM6 251 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 STEAP1Q9UHE8 339 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 SSR3Q9UNL2 185 aa12.71□□□□□ -0.37
LMX1B-204ENST00000561065 A0A1W2PPE3 182 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 METTL21EPA6NDL7 271 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 FAM90A9PA6NNJ1 464 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 C15orf65H3BRN8 121 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 RAB3BP20337 219 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 GADD45AP24522 165 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 CHATP28329 748 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 ARL6IP1Q15041 203 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 C2orf76Q3KRA6 126 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 KPRPQ5T749 579 aaPredicted RBP12.7□□□□□ -0.38
LMX1B-204ENST00000561065 TPRA1Q86W33 373 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 PRR18Q8N4B5 295 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 OR56B4Q8NH76 319 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 OR2S2Q9NQN1 319 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 HSF4Q9ULV5 492 aa12.7□□□□□ -0.38
LMX1B-204ENST00000561065 C12orf77C9JDV5 145 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 HBZP02008 142 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 SNRNP70P08621 437 aaKnown RBP12.69□□□□□ -0.38
LMX1B-204ENST00000561065 FGF9P31371 208 aaPredicted RBP12.69□□□□□ -0.38
LMX1B-204ENST00000561065 HTD2P86397 168 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 CD83Q01151 205 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 P2RY14Q15391 338 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 SIGIRRQ6IA17 410 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 OR10K2Q6IF99 312 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 FAM89BQ8N5H3 189 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 OR51D1Q8NGF3 324 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 R3HDM4Q96D70 268 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 FAAP24Q9BTP7 215 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 GHITMQ9H3K2 345 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 MBNL3Q9NUK0 354 aaKnown RBP12.69□□□□□ -0.38
LMX1B-204ENST00000561065 JPT1Q9UK76 154 aa12.69□□□□□ -0.38
LMX1B-204ENST00000561065 A0A1W2PRX2 142 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 PRB2P02812 416 aaPredicted RBP12.68□□□□□ -0.38
LMX1B-204ENST00000561065 LOXL3P58215 753 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 QRFPP83859 136 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 ZNF816Q0VGE8 651 aaPredicted RBP12.68□□□□□ -0.38
LMX1B-204ENST00000561065 HES1Q14469 280 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 SSX1Q16384 188 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 KCTD21Q4G0X4 260 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 C6orf201Q7Z4U5 140 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 MOB3BQ86TA1 216 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 DRAM1Q8N682 238 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 OR5AU1Q8NGC0 362 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 STUB1Q9UNE7 303 aa12.68□□□□□ -0.38
LMX1B-204ENST00000561065 IFITM5A6NNB3 132 aa12.67□□□□□ -0.38
LMX1B-204ENST00000561065 RCC1P18754 421 aaPredicted RBP12.67□□□□□ -0.38
LMX1B-204ENST00000561065 VEGFCP49767 419 aa12.67□□□□□ -0.38
LMX1B-204ENST00000561065 UNC119Q13432 240 aa12.67□□□□□ -0.38
LMX1B-204ENST00000561065 TIMM50Q3ZCQ8 353 aa12.67□□□□□ -0.38
LMX1B-204ENST00000561065 OXLD1Q5BKU9 147 aa12.67□□□□□ -0.38
LMX1B-204ENST00000561065 LY6G6FQ5SQ64 297 aa12.67□□□□□ -0.38
LMX1B-204ENST00000561065 SULT4A1Q9BR01 284 aa12.67□□□□□ -0.38
LMX1B-204ENST00000561065 LPAR5Q9H1C0 372 aa12.67□□□□□ -0.38
LMX1B-204ENST00000561065 MOB4Q9Y3A3 225 aa12.67□□□□□ -0.38
LMX1B-204ENST00000561065 IGHV3-43A0A0B4J1X8 118 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 HSD17B6O14756 317 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 YPEL1O60688 119 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 SCGNO76038 276 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 IGHV3-43DP0DP04 118 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 RAB6AP20340 208 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 HES5Q5TA89 166 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 C22orf42Q6IC83 251 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 SLC25A48Q6ZT89 311 aaKnown RBP12.66□□□□□ -0.38
LMX1B-204ENST00000561065 TGIF2LXQ8IUE1 241 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 OR4F17Q8NGA8 305 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 SETD6Q8TBK2 473 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 MRPL30Q8TCC3 161 aaKnown RBP12.66□□□□□ -0.38
LMX1B-204ENST00000561065 PTX4Q96A99 478 aa12.66□□□□□ -0.38
LMX1B-204ENST00000561065 RBMXL1Q96E39 390 aaKnown RBP12.66□□□□□ -0.38
LMX1B-204ENST00000561065 KCTD7Q96MP8 289 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms