RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 RPLP1P05386 114 aaKnown RBP12.73□□□□□ -0.37
SNX1-213ENST00000561026 F2RL1P55085 397 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 WNT4P56705 351 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 GPR50Q13585 617 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 VAX1Q5SQQ9 334 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 C8orf59Q8N0T1 100 aaPredicted RBP12.73□□□□□ -0.37
SNX1-213ENST00000561026 FAM71E2Q8N5Q1 922 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 NKAIN3Q8N8D7 197 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 RNF152Q8N8N0 203 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 RBMXL1Q96E39 390 aaKnown RBP12.73□□□□□ -0.37
SNX1-213ENST00000561026 RAX2Q96IS3 184 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 Q96M66 194 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 DUX3Q96PT4 197 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 UQCC2Q9BRT2 126 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 DCLRE1BQ9H816 532 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 TAF9BQ9HBM6 251 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 OR2S2Q9NQN1 319 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 MBNL3Q9NUK0 354 aaKnown RBP12.73□□□□□ -0.37
SNX1-213ENST00000561026 UBE2QL1A1L167 161 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 H0YHG0 523 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 MYL12BO14950 172 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 LANCL1O43813 399 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 RRP9O43818 475 aaKnown RBP12.72□□□□□ -0.37
SNX1-213ENST00000561026 ELANEP08246 267 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 FOXE3Q13461 319 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 MORN2Q502X0 79 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 CXorf66Q5JRM2 361 aaPredicted RBP12.72□□□□□ -0.37
SNX1-213ENST00000561026 LCNL1Q6ZST4 164 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 AHSA2Q719I0 299 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 ZNF554Q86TJ5 538 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 FBLIM1Q8WUP2 373 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 THRSPQ92748 146 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 CYYR1Q96J86 154 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 HSPB9Q9BQS6 159 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 PLCXD1Q9NUJ7 323 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 KCNIP1Q9NZI2 227 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 GHRLQ9UBU3 117 aa12.72□□□□□ -0.37
SNX1-213ENST00000561026 PDCD6O75340 191 aa12.71□□□□□ -0.37
SNX1-213ENST00000561026 MAPK3P27361 379 aaPredicted RBP12.71□□□□□ -0.37
SNX1-213ENST00000561026 SOX6P35712 828 aa12.71□□□□□ -0.37
SNX1-213ENST00000561026 CDX1P47902 265 aaPredicted RBP12.71□□□□□ -0.37
SNX1-213ENST00000561026 CFHR3Q02985 330 aa12.71□□□□□ -0.37
SNX1-213ENST00000561026 KIR2DS1Q14954 304 aa12.71□□□□□ -0.37
SNX1-213ENST00000561026 RCN1Q15293 331 aa12.71□□□□□ -0.37
SNX1-213ENST00000561026 UNQ9370/PRO34162Q6UXP9 181 aa12.71□□□□□ -0.37
SNX1-213ENST00000561026 NANOGP1Q8N7R0 232 aa12.71□□□□□ -0.37
SNX1-213ENST00000561026 TFAP2CQ92754 450 aa12.71□□□□□ -0.37
SNX1-213ENST00000561026 FAM46BQ96A09 425 aa12.71□□□□□ -0.37
SNX1-213ENST00000561026 IGHG4P01861 327 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 IGF1P05019 195 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 GP2P55259 537 aaKnown RBP12.7□□□□□ -0.38
SNX1-213ENST00000561026 LSAMPQ13449 338 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 GNMTQ14749 295 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 BPIFB6Q8NFQ5 453 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 OR52L2PQ8NGH6 319 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 OR8U1Q8NH10 309 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 MRPL30Q8TCC3 161 aaKnown RBP12.7□□□□□ -0.38
SNX1-213ENST00000561026 CST11Q9H112 138 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 FKBP14Q9NWM8 211 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 ZMAT5Q9UDW3 170 aaKnown RBP12.7□□□□□ -0.38
SNX1-213ENST00000561026 ZNF580Q9UK33 172 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 JPT1Q9UK76 154 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 ERGIC3Q9Y282 383 aa12.7□□□□□ -0.38
SNX1-213ENST00000561026 VDAC1P21796 283 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 RAB25P57735 213 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 HTD2P86397 168 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 INSL4Q14641 139 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 DEFB136Q30KP8 78 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 C6orf141Q5SZD1 244 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 C11orf87Q6NUJ2 197 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 C5orf24Q7Z6I8 188 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 ABHD14AQ9BUJ0 271 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 YPEL1O60688 119 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 UBBP0CG47 229 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 SLC2A2P11168 524 aaPredicted RBP12.69□□□□□ -0.38
SNX1-213ENST00000561026 PSMB8P28062 276 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 PPP1CCP36873 323 aaKnown RBP12.69□□□□□ -0.38
SNX1-213ENST00000561026 DGCR2P98153 550 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 CD69Q07108 199 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 MMDQ15546 238 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 ACSM3Q53FZ2 586 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 OGFRL1Q5TC84 451 aaPredicted RBP12.69□□□□□ -0.38
SNX1-213ENST00000561026 ODF3L1Q8IXM7 274 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 MS4A15Q8N5U1 240 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 GALMQ96C23 342 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 KCTD7Q96MP8 289 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 YPEL2Q96QA6 119 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 B9D2Q9BPU9 175 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 ZNF107Q9UII5 783 aaPredicted RBP12.69□□□□□ -0.38
SNX1-213ENST00000561026 LRRC42Q9Y546 428 aa12.69□□□□□ -0.38
SNX1-213ENST00000561026 NBEAL2Q6ZNJ1 2754 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 CASQ2O14958 399 aaPredicted RBP12.68□□□□□ -0.38
SNX1-213ENST00000561026 OR5H8P0DN80 308 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 VSIG8P0DPA2 414 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 CHATP28329 748 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 DCTN2Q13561 401 aaKnown RBP12.68□□□□□ -0.38
SNX1-213ENST00000561026 NKAPLQ5M9Q1 402 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 LY6G6FQ5SQ64 297 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 FAM27D1Q5T7N8 215 aa12.68□□□□□ -0.38
SNX1-213ENST00000561026 RNLSQ5VYX0 342 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms