RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 OR6C3Q9NZP0 311 aa8.61□□□□□ -1.03
TPM1-227ENST00000560970 NBEAL2Q6ZNJ1 2754 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 A0A0B4J203 849 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 KBTBD11-OT1A0A1B0GTJ5 212 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 TMEM30CPA0ZSE6 113 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 ZNF729A6NN14 1252 aaPredicted RBP8.6□□□□□ -1.03
TPM1-227ENST00000560970 LDLRAD4O15165 306 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 PDCD6O75340 191 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 CD33P20138 364 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 MYL9P24844 172 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 CHATP28329 748 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 S100A5P33763 92 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 RPS19P39019 145 aaKnown RBP8.6□□□□□ -1.03
TPM1-227ENST00000560970 DYNLT3P51808 116 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 TMEM95Q3KNT9 176 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 FAM53AQ6NSI3 398 aaPredicted RBP8.6□□□□□ -1.03
TPM1-227ENST00000560970 CCBE1Q6UXH8 406 aaPredicted RBP8.6□□□□□ -1.03
TPM1-227ENST00000560970 MFSD4AQ8N468 514 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 OR11H6Q8NGC7 330 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 OR51D1Q8NGF3 324 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 OR4P4Q8NGL7 312 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 UBALD1Q8TB05 177 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 NEK7Q8TDX7 302 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 KIRREL1Q96J84 757 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 LPAR5Q9H1C0 372 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 NCOR1P1Q9H4R4 102 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 V9GY05 133 aa8.6□□□□□ -1.03
TPM1-227ENST00000560970 TMEM272A0A1B0GTI8 110 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 UBE2QL1A1L167 161 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 FOXI3A8MTJ6 420 aaPredicted RBP8.59□□□□□ -1.03
TPM1-227ENST00000560970 NPIPB11E5RHQ5 1161 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 C15orf65H3BRN8 121 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 AIPO00170 330 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 MT-ND4P03905 459 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 PF4V1P10720 104 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 ARSBP15848 533 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 RAB3BP20337 219 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 FUT3P21217 361 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 CD34P28906 385 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 ETV6P41212 452 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 ZNF45Q02386 682 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 SSX2Q16385 188 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 LTC4SQ16873 150 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 NKAPLQ5M9Q1 402 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 OR2W3Q7Z3T1 314 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 C6orf201Q7Z4U5 140 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 C5orf24Q7Z6I8 188 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 TPRA1Q86W33 373 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 GAPTQ8N292 157 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 OR4K15Q8NH41 348 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 RFESDQ8TAC1 157 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 KCNG3Q8TAE7 436 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 CCDC107Q8WV48 283 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 LEAP2Q969E1 77 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 FAM3DQ96BQ1 224 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 MALSU1Q96EH3 234 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 SULT4A1Q9BR01 284 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 CLEC7AQ9BXN2 247 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 BARHL1Q9BZE3 327 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 C6orf62Q9GZU0 229 aaPredicted RBP8.59□□□□□ -1.03
TPM1-227ENST00000560970 LINC00574Q9H8X3 128 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 SPACA1Q9HBV2 294 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 ETAA1Q9NY74 926 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 IDI2-AS1Q9NZ38 188 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 STEAP1Q9UHE8 339 aa8.59□□□□□ -1.03
TPM1-227ENST00000560970 A0A087X0M5 115 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 A0A1B0GX30 115 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 IFITM5A6NNB3 132 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 MCRIP1C9JLW8 97 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 PDCD5O14737 125 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 SOCS1O15524 211 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 IGHV3-7P01780 117 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 CLEC2LP0C7M8 214 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 NFYBP25208 207 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 CD40LGP29965 261 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 SDC2P34741 201 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 RAB13P51153 203 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 C2orf76Q3KRA6 126 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 MINOS1Q5TGZ0 78 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 ABHD12Q8N2K0 398 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 MRPL30Q8TCC3 161 aaKnown RBP8.58□□□□□ -1.04
TPM1-227ENST00000560970 MINOS1-NBL1R4GNA1 71 aa8.58□□□□□ -1.04
TPM1-227ENST00000560970 DNAH9Q9NYC9 4486 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 IGHV3-43A0A0B4J1X8 118 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 A0A1W2PRX2 142 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 C12orf77C9JDV5 145 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 TMEM127O75204 238 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 IGLV1-47P01700 117 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 PF4P02776 101 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 IGHV3-43DP0DP04 118 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 SLC2A2P11168 524 aaPredicted RBP8.57□□□□□ -1.04
TPM1-227ENST00000560970 IGLL1P15814 213 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 RCC1P18754 421 aaPredicted RBP8.57□□□□□ -1.04
TPM1-227ENST00000560970 GNG10P50151 68 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 TMEM50BP56557 158 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 MXD1Q05195 221 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 HLA-DRB5Q30154 266 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 VAX1Q5SQQ9 334 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 OR52W1Q6IF63 320 aa8.57□□□□□ -1.04
TPM1-227ENST00000560970 C16orf82Q7Z2V1 217 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms