RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 Q3ZCU0 254 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 C6orf183Q5T699 404 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 SIGIRRQ6IA17 410 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 BRD3OSQ6XYD6 125 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 LDLRAD3Q86YD5 345 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 PLPPR1Q8TBJ4 325 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 ZNF596Q8TC21 504 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 GPX8Q8TED1 209 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 PHF21AQ96BD5 680 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 TMEM133Q9H2Q1 129 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 DPAGT1Q9H3H5 408 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 PLEKHJ1Q9NW61 149 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 MGAT4AQ9UM21 535 aa11.42□□□□□ -0.58
PKNOX1-209ENST00000560448 NAP1L6A6NFF2 107 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 NPIPB11E5RHQ5 1161 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 MT-ND4P03905 459 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 BLVRBP30043 206 aaPredicted RBP11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 PRSS3P35030 304 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 AP3S2P59780 193 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 ZNF260Q3ZCT1 412 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 MINOS1Q5TGZ0 78 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 ZNF626Q68DY1 528 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 HCP5Q6MZN7 132 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 Q6YL49 198 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 MOB1BQ7L9L4 216 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 OR52M1Q8NGK5 317 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 SSMEM1Q8WWF3 244 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 DEDD2Q8WXF8 326 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 TMEM158Q8WZ71 300 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 SCPEP1Q9HB40 452 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 MBNL3Q9NUK0 354 aaKnown RBP11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 CALYQ9NYX4 217 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 TRAPPC2LQ9UL33 140 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 MINOS1-NBL1R4GNA1 71 aa11.41□□□□□ -0.58
PKNOX1-209ENST00000560448 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 IGHV2-26A0A0B4J1V2 119 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 ODF3BA8MYP8 253 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 INMT-MINDY4F8WBC2 141 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 RBBP9O75884 186 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 TCRBP04435 133 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 MELTFP08582 738 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 TRAPPC2P0DI81 140 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 TRAPPC2BP0DI82 140 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 HLA-DMAP28067 261 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 SAA4P35542 130 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 RPL15P61313 204 aaKnown RBP11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 C17orf58Q2M2W7 97 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 NKAPLQ5M9Q1 402 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 RUSC1-AS1Q66K80 236 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 OR13A1Q8NGR1 328 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 C22orf15Q8WYQ4 148 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 CLEC7AQ9BXN2 247 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 COPZ2Q9P299 210 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 NUBP2Q9Y5Y2 271 aa11.4□□□□□ -0.58
PKNOX1-209ENST00000560448 A0A0A6YYD4 124 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 HMX3A6NHT5 357 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 FOXI3A8MTJ6 420 aaPredicted RBP11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 SPINT2O43291 252 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 CCR6P51684 374 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 TATDN3Q17R31 274 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 DEFB112Q30KQ8 113 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 ZNF782Q6ZMW2 699 aaPredicted RBP11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 Q6ZTK2 550 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 BCL6BQ8N143 479 aaPredicted RBP11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 SIGLECL1Q8N7X8 197 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 BEND2Q8NDZ0 799 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 OR10R2Q8NGX6 335 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 MRGPRDQ8TDS7 321 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 MALSU1Q96EH3 234 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 KIRREL1Q96J84 757 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 NICN1Q9BSH3 213 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 MEGF9Q9H1U4 602 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 ING3Q9NXR8 418 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 TAS2R8Q9NYW2 309 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 IDI2-AS1Q9NZ38 188 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 KCNIP1Q9NZI2 227 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 ZNF581Q9P0T4 197 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 ALG5Q9Y673 324 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 JMJD1CQ15652 2540 aa11.39□□□□□ -0.59
PKNOX1-209ENST00000560448 MXRA5Q9NR99 2828 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 TRBV6-6A0A0A6YYG2 114 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 BTBD17A6NE02 478 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 SERPINE3A8MV23 424 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 ARG1P05089 322 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 LPLP06858 475 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 CSF1P09603 554 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 ARHGDIBP52566 201 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 PRRX1P54821 245 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 RAG2P55895 527 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 BAMBIQ13145 260 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 KLRD1Q13241 179 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 AKAP14Q86UN6 197 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 ABHD12Q8N2K0 398 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 PNKDQ8N490 385 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 C8orf31Q8N9H6 132 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 OR5R1Q8NH85 324 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 OR9G1Q8NH87 305 aa11.38□□□□□ -0.59
PKNOX1-209ENST00000560448 FAM216AQ8WUB2 273 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms