RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ZNF736B4DX44 427 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 CCRL2O00421 344 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 FBXO24O75426 580 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 IGKV1D-33P01593 117 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 IGKV1-33P01594 117 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 FAM106CPP0CH98 169 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 ARSBP15848 533 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 BLVRBP30043 206 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 RAB7AP51149 207 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 ZNF816Q0VGE8 651 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 HES1Q14469 280 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 RAB11BQ15907 218 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 C2orf68Q2NKX9 166 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 HES5Q5TA89 166 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 CD200R1LQ6Q8B3 271 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 SLC25A48Q6ZT89 311 aaKnown RBP9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 MOB3BQ86TA1 216 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 THNSL2Q86YJ6 484 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 OR8H3Q8N146 312 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 C8orf31Q8N9H6 132 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 DTX3Q8N9I9 347 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 AKR1E2Q96JD6 320 aa9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 CITED2Q99967 270 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 HDHD3Q9BSH5 251 aaPredicted RBP9.27□□□□□ -0.93
RABGGTA-216ENST00000560243 FOXI3A8MTJ6 420 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 ADARB2-AS1A8MUL3 147 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 H3BUI4 141 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 NAPSAO96009 420 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 GAPDHP04406 335 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 CSF1P09603 554 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 PPP1CCP36873 323 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 TMEM50BP56557 158 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 NSUN5P1Q3KNT7 163 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 C2orf76Q3KRA6 126 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 C9orf152Q5JTZ5 239 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 UBE2UQ5VVX9 321 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 C10orf99Q6UWK7 81 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 OR2W3Q7Z3T1 314 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 FAM89BQ8N5H3 189 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 RTN4IP1Q8WWV3 396 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 FAM3DQ96BQ1 224 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 Q9H521 79 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 OR2S2Q9NQN1 319 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 KCNIP1Q9NZI2 227 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 AK3Q9UIJ7 227 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 RRP15Q9Y3B9 282 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 V9GY05 133 aa9.26□□□□□ -0.93
RABGGTA-216ENST00000560243 TGP01266 2768 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 A0A0B4J203 849 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 TMEM272A0A1B0GTI8 110 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 TRDV1A0A1B0GX56 115 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 SMIM30A4D0T7 59 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 LDLRAD4O15165 306 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 KCNAB3O43448 404 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 PEX14O75381 377 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 TMEM11P17152 192 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 PSMB9P28065 219 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 VEGFCP49767 419 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 HMGN3Q15651 99 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 MORN2Q502X0 79 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 TCTEX1D4Q5JR98 221 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 C22orf42Q6IC83 251 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 ZNF880Q6PDB4 577 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 TRAT1Q6PIZ9 186 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 NR2C2APQ86WQ0 139 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 SVOPQ8N4V2 548 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 C5orf56Q8N8D9 126 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 OR5AU1Q8NGC0 362 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 SETD6Q8TBK2 473 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 ARHGAP5-AS1Q96IT6 56 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 EAF1Q96JC9 268 aaPredicted RBP9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 PLEKHJ1Q9NW61 149 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 MOB4Q9Y3A3 225 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 LRRC42Q9Y546 428 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 PLXNB1O43157 2135 aa9.25□□□□□ -0.93
RABGGTA-216ENST00000560243 TRAV1-2A0A0B4J238 106 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 WIPF1O43516 503 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 MRPS14O60783 128 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 ZNF137PP52743 207 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 EBI3Q14213 229 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 TMEM30BQ3MIR4 351 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 Q3ZCU0 254 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 PLAC9Q5JTB6 97 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 ZNF554Q86TJ5 538 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 ODF3L1Q8IXM7 274 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 Q8N6K4 173 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 IL1F10Q8WWZ1 152 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 URM1Q9BTM9 101 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 PARP12Q9H0J9 701 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 CHMP1AQ9HD42 196 aaPredicted RBP9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 RAB9BQ9NP90 201 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 STEAP1Q9UHE8 339 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 JPT1Q9UK76 154 aa9.24□□□□□ -0.93
RABGGTA-216ENST00000560243 PRKDCP78527 4128 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-216ENST00000560243 A0A1W2PRX2 142 aa9.23□□□□□ -0.93
RABGGTA-216ENST00000560243 LINC01548A6NM66 108 aa9.23□□□□□ -0.93
RABGGTA-216ENST00000560243 IFITM5A6NNB3 132 aa9.23□□□□□ -0.93
RABGGTA-216ENST00000560243 M0QZK8 103 aa9.23□□□□□ -0.93
RABGGTA-216ENST00000560243 IL3RAP26951 378 aa9.23□□□□□ -0.93
RABGGTA-216ENST00000560243 OR3A3P47888 321 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms