RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 SHBGP04278 402 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 FCGR3AP08637 254 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 P0DMU3 169 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 FAM231AP0DMU4 169 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 FAM231CP0DMU5 169 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 LAMP1P11279 417 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 SDC1P18827 310 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 TAC1P20366 129 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 IMPDH1P20839 514 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 MSR1P21757 451 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 BGNP21810 368 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 COX7A1P24310 79 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 PSMB8P28062 276 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 LAP3P28838 519 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 CEACAM3P40198 252 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 DAP3P51398 398 aaKnown RBP2.05□□□□□ -2.08
LRRC28-218ENST00000560236 MAGOHP61326 146 aaKnown RBP2.05□□□□□ -2.08
LRRC28-218ENST00000560236 HBA1P69905 142 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 CXCL6P80162 114 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 FUT5Q11128 374 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 DGUOKQ16854 277 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF678Q5SXM1 525 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 Q5VSD8 79 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 LCN12Q6JVE5 192 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 LCN8Q6JVE9 175 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 SMARCD3Q6STE5 483 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 Q6ZRG5 221 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 PGAP1Q75T13 922 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 KCTD9Q7L273 389 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 PRSS48Q7RTY5 328 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 TRPM8Q7Z2W7 1104 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 LYG2Q86SG7 212 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 SLC22A9Q8IVM8 553 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 C10orf107Q8IVU9 208 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 LYPD1Q8N2G4 141 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 Q8N402 240 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 Q8N9L7 120 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 CYB561A3Q8NBI2 242 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 OR2K2Q8NGT1 345 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 OR52P1PQ8NH57 321 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 OR5AK3PQ8NH89 298 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 ANGPTL6Q8NI99 470 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 NDNFQ8TB73 568 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 MYOZ3Q8TDC0 251 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 PYROXD1Q8WU10 500 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 LRRC29Q8WV35 223 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 DLX4Q92988 240 aaPredicted RBP2.05□□□□□ -2.08
LRRC28-218ENST00000560236 FLYWCH2Q96CP2 140 aaKnown RBP2.05□□□□□ -2.08
LRRC28-218ENST00000560236 CXorf58Q96LI9 332 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 TEX37Q96LM6 180 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 GAFA1Q96PS6 74 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 FMO2Q99518 471 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 TMEM43Q9BTV4 400 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 ADAT1Q9BUB4 502 aaKnown RBP2.05□□□□□ -2.08
LRRC28-218ENST00000560236 RAB17Q9H0T7 212 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 AMBNQ9NP70 447 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 SLC2A8Q9NY64 477 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 TAS2R5Q9NYW4 299 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 DPM3Q9P2X0 92 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 P2RX2Q9UBL9 471 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 ZNF391Q9UJN7 358 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 KLHDC2Q9Y2U9 406 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 UGT2A1Q9Y4X1 527 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 TIMM22Q9Y584 194 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 HILPDAQ9Y5L2 63 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 FAT3Q8TDW7 4589 aa2.05□□□□□ -2.08
LRRC28-218ENST00000560236 RNF213Q63HN8 5207 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 IGKV1D-42A0A075B6H8 117 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 IGHV3OR16-12A0A075B7B8 117 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 IGHV3-35A0A0C4DH35 117 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 A0A0G2JLM5 398 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 C13orf42A0A1B0GVH6 325 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 TCRBV9S1A1TA0A576 114 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 OR2AT4A6NND4 320 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 A8MT66 165 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 HMGN4O00479 90 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 BHLHE40O14503 412 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ATP5HO75947 161 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ANP32DO95626 131 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 C1QCP02747 245 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 PRB4P10163 310 aaPredicted RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 NCK1P16333 377 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 VDAC1P21796 283 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 GCAP28676 217 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 DDOSTP39656 456 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 SERPINB8P50452 374 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 SNU13P55769 128 aaKnown RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 LSM6P62312 80 aaKnown RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 RPL31P62899 125 aaKnown RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 DR1Q01658 176 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 CAV1Q03135 178 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 DYNC1I2Q13409 638 aaKnown RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 AQP6Q13520 282 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 ENDOGQ14249 297 aaKnown RBP2.04□□□□□ -2.08
LRRC28-218ENST00000560236 SYPL1Q16563 259 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 AARDQ4LEZ3 155 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 LDLRAD2Q5SZI1 272 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 C1orf134Q5TEV5 83 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 PVRIGQ6DKI7 326 aa2.04□□□□□ -2.08
LRRC28-218ENST00000560236 OR4F3Q6IEY1 312 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms