RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 SETD2Q9BYW2 2564 aaPredicted RBP8.21□□□□□ -1.09
USP3-216ENST00000559873 A0A1W2PRD5 423 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 A0A1W2PRF3 423 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 A0A1W2PRM7 423 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 FAM172BPA6NC97 362 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 BTBD17A6NE02 478 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 LEUTXA8MZ59 168 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 MMP23AO75900 390 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 LPLP06858 475 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 CTXN2P0C2S0 81 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 HTR1DP28221 377 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 GDNFP39905 211 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 GNG10P50151 68 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 ARPC4P59998 168 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 MRPS10P82664 201 aaKnown RBP8.21□□□□□ -1.1
USP3-216ENST00000559873 HLA-DRB5Q30154 266 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 HCP5Q6MZN7 132 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 CNIH2Q6PI25 160 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 SNX29P2Q8IUI4 249 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 OR2AK2Q8NG84 335 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 OR10X1Q8NGY0 326 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 UBALD1Q8TB05 177 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 DIRAS2Q96HU8 199 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 SLC6A7Q99884 636 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 MMP28Q9H239 520 aa8.21□□□□□ -1.1
USP3-216ENST00000559873 A0A0A6YYJ9 748 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 IGHV3-43A0A0B4J1X8 118 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 A0A0U1RQK1 487 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 J3QR06 171 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 SULT1C2O00338 296 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 CTDSP2O14595 271 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 TCF21O43680 179 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 YPEL1O60688 119 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 IGHV3-43DP0DP04 118 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 RAB7AP51149 207 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 DLX1P56177 255 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 ACTBP60709 375 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 ACTG1P63261 375 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 PRB3Q04118 309 aaPredicted RBP8.2□□□□□ -1.1
USP3-216ENST00000559873 MADCAM1Q13477 382 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 IL18Q14116 193 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 LY6G6FQ5SQ64 297 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 PYHIN1Q6K0P9 492 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 CCDC144NLQ6NUI1 221 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 PIP4P2Q8N4L2 257 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 LINC00311Q8N616 119 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 BEST4Q8NFU0 473 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 OR10V1Q8NGI7 309 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 OR4P4Q8NGL7 312 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 OR10J5Q8NHC4 309 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 FAM216AQ8WUB2 273 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 C22orf15Q8WYQ4 148 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 MALSU1Q96EH3 234 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 YPEL2Q96QA6 119 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 OCSTAMPQ9BR26 566 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 GINS4Q9BRT9 223 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 CABLES2Q9BTV7 478 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 ABHD14AQ9BUJ0 271 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 ST6GALNAC5Q9BVH7 336 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 GHITMQ9H3K2 345 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 DPM3Q9P2X0 92 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 SLC23A1Q9UHI7 598 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 ZNF230Q9UIE0 474 aaPredicted RBP8.2□□□□□ -1.1
USP3-216ENST00000559873 ANXA10Q9UJ72 324 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 PSG11Q9UQ72 335 aa8.2□□□□□ -1.1
USP3-216ENST00000559873 OOSP1A8MZH6 123 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 ITGB1BP1O14713 200 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 TXNL1O43396 289 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 SSX5O60225 188 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 IGLV1-47P01700 117 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 HLA-DQB1P01920 261 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 SCTP09683 121 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 RCVRNP35243 200 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 LOXL3P58215 753 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 TAS2R46P59540 309 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 AANATQ16613 207 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 SPANXN2Q5MJ10 180 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 FOXB2Q5VYV0 432 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 Q6ZPA2 131 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 HOGA1Q86XE5 327 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 LDLRAD3Q86YD5 345 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 TMEM86BQ8N661 226 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 SIGLECL1Q8N7X8 197 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 DTX3Q8N9I9 347 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 OR52L2PQ8NGH6 319 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 SSMEM1Q8WWF3 244 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 MAFIPQ8WZ33 124 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 TOMM40LQ969M1 308 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 RPEQ96AT9 228 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 CYYR1Q96J86 154 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 MIXL1Q9H2W2 232 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 ABCB10Q9NRK6 738 aa8.19□□□□□ -1.1
USP3-216ENST00000559873 ELF5Q9UKW6 265 aaPredicted RBP8.19□□□□□ -1.1
USP3-216ENST00000559873 ZFHX3Q15911 3703 aa8.18□□□□□ -1.1
USP3-216ENST00000559873 TRBV6-7A0A0A0MS04 114 aa8.18□□□□□ -1.1
USP3-216ENST00000559873 A6NHS1 94 aa8.18□□□□□ -1.1
USP3-216ENST00000559873 BUB1B-PAK6H3BSN5 160 aa8.18□□□□□ -1.1
USP3-216ENST00000559873 HSD17B6O14756 317 aa8.18□□□□□ -1.1
USP3-216ENST00000559873 BET1O15155 118 aa8.18□□□□□ -1.1
USP3-216ENST00000559873 GSTT2P0CG29 244 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms