RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 RBMXL1Q96E39 390 aaKnown RBP10.19□□□□□ -0.78
TPM1-220ENST00000559556 MRPS24Q96EL2 167 aaKnown RBP10.19□□□□□ -0.78
TPM1-220ENST00000559556 ASCL2Q99929 193 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 GNG12Q9UBI6 72 aa10.19□□□□□ -0.78
TPM1-220ENST00000559556 TRBV5-5A0A0J9YX44 114 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 LOC100130705A0A1B0GUX0 176 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 MAGEA13PA6NCF6 341 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 OGG1O15527 345 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 GPX5O75715 221 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 SC5DO75845 299 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 IGLV1-40P01703 118 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 HLA-DRB1P01911 266 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 FSTP19883 344 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 MYF6P23409 242 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 ETV1P50549 477 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 GPR176Q14439 515 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 MMDQ15546 238 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 OR10V1Q8NGI7 309 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 OR13C5Q8NGS8 318 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 OR4K15Q8NH41 348 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 C9orf16Q9BUW7 83 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 KLK15Q9H2R5 256 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 GNB4Q9HAV0 340 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 ETAA1Q9NY74 926 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 TRAPPC2LQ9UL33 140 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 VSIG4Q9Y279 399 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 SMAD5-AS1Q9Y6J3 95 aa10.18□□□□□ -0.78
TPM1-220ENST00000559556 FAM90A10PA6NDY2 464 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 FAM90A7PA6NKC0 464 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 FAM90A23PA8MXZ1 464 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 MCRIP1C9JLW8 97 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 ATP6V0E1O15342 81 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 CA11O75493 328 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 WBP4O75554 376 aaKnown RBP10.17□□□□□ -0.78
TPM1-220ENST00000559556 RCC1P18754 421 aaPredicted RBP10.17□□□□□ -0.78
TPM1-220ENST00000559556 DCKP27707 260 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 GNB1P62873 340 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 SMN1Q16637 294 aaKnown RBP10.17□□□□□ -0.78
TPM1-220ENST00000559556 OR2G6Q5TZ20 316 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 RAB12Q6IQ22 244 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 TMPRSS11AQ6ZMR5 421 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 ZNF554Q86TJ5 538 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 PRR18Q8N4B5 295 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 OR1L1Q8NH94 360 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 RDH12Q96NR8 316 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 SLC29A1Q99808 456 aa10.17□□□□□ -0.78
TPM1-220ENST00000559556 MBNL3Q9NUK0 354 aaKnown RBP10.17□□□□□ -0.78
TPM1-220ENST00000559556 TRAV8-7A0A075B6U6 113 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 G3V318 75 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 LY86O95711 162 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 LALBAP00709 142 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 ACTBP60709 375 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 RPS11P62280 158 aaKnown RBP eCLIP10.16□□□□□ -0.78
TPM1-220ENST00000559556 ADARB1P78563 741 aaKnown RBP10.16□□□□□ -0.78
TPM1-220ENST00000559556 Q499Y3 187 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 MORN2Q502X0 79 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 CASC10Q5T4H9 136 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 FAM27D1Q5T7N8 215 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 DMKNQ6E0U4 476 aaPredicted RBP10.16□□□□□ -0.78
TPM1-220ENST00000559556 TMEM65Q6PI78 240 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 ZNF429Q86V71 674 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 ODF3L1Q8IXM7 274 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 OR1N2Q8NGR9 330 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 MUC7Q8TAX7 377 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 Q96M66 194 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 ABHD14AQ9BUJ0 271 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 OR51J1Q9H342 316 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 ISYNA1Q9NPH2 558 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 CHCHD3Q9NX63 227 aaKnown RBP10.16□□□□□ -0.78
TPM1-220ENST00000559556 CKLFQ9UBR5 152 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 MRPS28Q9Y2Q9 187 aaKnown RBP10.16□□□□□ -0.78
TPM1-220ENST00000559556 PEX16Q9Y5Y5 336 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 WSB1Q9Y6I7 421 aa10.16□□□□□ -0.78
TPM1-220ENST00000559556 IGHV7-81A0A0B4J1V7 117 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 TRAV41A0A0B4J266 112 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 NBR2O15453 112 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 GLAP06280 429 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 CNTFRP26992 372 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 CRIP2P52943 208 aaPredicted RBP10.15□□□□□ -0.78
TPM1-220ENST00000559556 GNMTQ14749 295 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 C5orf64Q2M2E5 130 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 YIF1BQ5BJH7 314 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 C19orf54Q5BKX5 351 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 LY6G6FQ5SQ64 297 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 SIGIRRQ6IA17 410 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 CDH26Q8IXH8 852 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 MINDY2Q8NBR6 621 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 GHSRQ92847 366 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 MUL1Q969V5 352 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 PGLYRP3Q96LB9 341 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 RCHY1Q96PM5 261 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 NABP2Q9BQ15 211 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 MRPL20Q9BYC9 149 aaKnown RBP10.15□□□□□ -0.78
TPM1-220ENST00000559556 ANKRD60Q9BZ19 345 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 TAF9BQ9HBM6 251 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 S100A14Q9HCY8 104 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 OR2S2Q9NQN1 319 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 PARP11Q9NR21 331 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 BABAM2Q9NXR7 383 aa10.15□□□□□ -0.78
TPM1-220ENST00000559556 JPT1Q9UK76 154 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms