RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 FAM3AP98173 230 aa5.54□□□□□ -1.52
CASC4-208ENST00000559151 MMDQ15546 238 aa5.54□□□□□ -1.52
CASC4-208ENST00000559151 TCF23Q7RTU1 214 aa5.54□□□□□ -1.52
CASC4-208ENST00000559151 KCTD4Q8WVF5 259 aa5.54□□□□□ -1.52
CASC4-208ENST00000559151 TVP23CQ96ET8 276 aa5.54□□□□□ -1.52
CASC4-208ENST00000559151 TM2D3Q9BRN9 247 aa5.54□□□□□ -1.52
CASC4-208ENST00000559151 UPF3BQ9BZI7 483 aaKnown RBP5.54□□□□□ -1.52
CASC4-208ENST00000559151 OR5V1Q9UGF6 321 aa5.54□□□□□ -1.52
CASC4-208ENST00000559151 NAGKQ9UJ70 344 aa5.54□□□□□ -1.52
CASC4-208ENST00000559151 ABCA6Q8N139 1617 aa5.54□□□□□ -1.52
CASC4-208ENST00000559151 SHROOM3Q8TF72 1996 aa5.54□□□□□ -1.52
CASC4-208ENST00000559151 ABCC1P33527 1531 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 ITSN2Q9NZM3 1697 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 PRXQ9BXM0 1461 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 TOX3O15405 576 aaPredicted RBP5.53□□□□□ -1.52
CASC4-208ENST00000559151 IGLV6-57P01721 117 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 CTLA4P16410 223 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 ZNF708P17019 499 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 INPP1P49441 399 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 SKP2Q13309 424 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 ZCWPW2Q504Y3 356 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 EIF4E3Q8N5X7 224 aaKnown RBP5.53□□□□□ -1.52
CASC4-208ENST00000559151 KRTCAP2Q8N6L1 136 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 APOBEC3DQ96AK3 386 aaPredicted RBP5.53□□□□□ -1.52
CASC4-208ENST00000559151 IGF2BP2-AS1Q96M15 143 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 ABCG5Q9H222 651 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 PLCH2O75038 1416 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 FGD6Q6ZV73 1430 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 NWD1Q149M9 1564 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 CACNA1DQ01668 2161 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 PRR14LQ5THK1 2151 aa5.53□□□□□ -1.52
CASC4-208ENST00000559151 NUP153P49790 1475 aaKnown RBP5.52□□□□□ -1.53
CASC4-208ENST00000559151 KDM5CP41229 1560 aa5.52□□□□□ -1.53
CASC4-208ENST00000559151 BLMP54132 1417 aaPredicted RBP5.52□□□□□ -1.53
CASC4-208ENST00000559151 F5H5K5 113 aa5.52□□□□□ -1.53
CASC4-208ENST00000559151 CDK14O94921 469 aa5.52□□□□□ -1.53
CASC4-208ENST00000559151 CPSF4O95639 269 aaKnown RBP5.52□□□□□ -1.53
CASC4-208ENST00000559151 ASS1P00966 412 aaKnown RBP5.52□□□□□ -1.53
CASC4-208ENST00000559151 PAFAH1B3Q15102 231 aaKnown RBP5.52□□□□□ -1.53
CASC4-208ENST00000559151 PYDC2Q56P42 97 aa5.52□□□□□ -1.53
CASC4-208ENST00000559151 HES3Q5TGS1 186 aa5.52□□□□□ -1.53
CASC4-208ENST00000559151 ZNF514Q96K75 400 aaPredicted RBP5.52□□□□□ -1.53
CASC4-208ENST00000559151 UGT2B28Q9BY64 529 aa5.52□□□□□ -1.53
CASC4-208ENST00000559151 ALX4Q9H161 411 aaPredicted RBP5.52□□□□□ -1.53
CASC4-208ENST00000559151 NID2Q14112 1375 aa5.52□□□□□ -1.53
CASC4-208ENST00000559151 ZC3H13Q5T200 1668 aaKnown RBP5.51□□□□□ -1.53
CASC4-208ENST00000559151 ADGBQ8N7X0 1667 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 GGTLC3B5MD39 225 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 D6RAR5 112 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 GOLGA8RI6L899 631 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 CETN3O15182 167 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 CYTH3O43739 400 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 UBE2G2P60604 165 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 DHRS2Q13268 280 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 MTERF4Q7Z6M4 381 aaKnown RBP5.51□□□□□ -1.53
CASC4-208ENST00000559151 BLIDQ8IZY5 108 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 OR5D18Q8NGL1 313 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 KCNIP2Q9NS61 270 aa5.51□□□□□ -1.53
CASC4-208ENST00000559151 KDM5DQ9BY66 1539 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 FABP12A6NFH5 140 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 YEATS4O95619 227 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 PET100P0DJ07 73 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 NEFHP12036 1026 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 TTC33Q6PID6 262 aaPredicted RBP5.5□□□□□ -1.53
CASC4-208ENST00000559151 LFNGQ8NES3 379 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 OR11G2Q8NGC1 345 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 OR9I1Q8NGQ6 314 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 ZNRF2Q8NHG8 242 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 SPPL2BQ8TCT7 592 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 TRIB3Q96RU7 358 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 CHST5Q9GZS9 411 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 ZNF518AQ6AHZ1 1483 aa5.5□□□□□ -1.53
CASC4-208ENST00000559151 SCAF11Q99590 1463 aaKnown RBP5.5□□□□□ -1.53
CASC4-208ENST00000559151 ZBED9Q6R2W3 1325 aa5.49□□□□□ -1.53
CASC4-208ENST00000559151 LIN7AO14910 233 aaPredicted RBP5.49□□□□□ -1.53
CASC4-208ENST00000559151 GYPCP04921 128 aa5.49□□□□□ -1.53
CASC4-208ENST00000559151 GUSBP08236 651 aa5.49□□□□□ -1.53
CASC4-208ENST00000559151 P0C880 135 aa5.49□□□□□ -1.53
CASC4-208ENST00000559151 SPIN3Q5JUX0 258 aa5.49□□□□□ -1.53
CASC4-208ENST00000559151 LYZL2Q7Z4W2 148 aa5.49□□□□□ -1.53
CASC4-208ENST00000559151 C7orf50Q9BRJ6 194 aaKnown RBP5.49□□□□□ -1.53
CASC4-208ENST00000559151 RTEL1-TNFRSF6BF6WH68 1400 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 KIDINS220Q9ULH0 1771 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 LRRC9Q6ZRR7 1453 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 MLH3Q9UHC1 1453 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 IGKV1D-37A0A075B6S9 117 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 ADAP1O75689 374 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 LTAP01374 205 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 CENPWQ5EE01 88 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 FAM45BPQ6NSW5 357 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 SLC13A5Q86YT5 568 aaPredicted RBP5.48□□□□□ -1.53
CASC4-208ENST00000559151 GPR22Q99680 433 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 ARL6Q9H0F7 186 aa5.48□□□□□ -1.53
CASC4-208ENST00000559151 IGKV4-1P06312 121 aa5.47□□□□□ -1.53
CASC4-208ENST00000559151 SPNS3Q6ZMD2 512 aa5.47□□□□□ -1.53
CASC4-208ENST00000559151 VN1R4Q7Z5H5 301 aa5.47□□□□□ -1.53
CASC4-208ENST00000559151 LYPD6Q86Y78 171 aa5.47□□□□□ -1.53
CASC4-208ENST00000559151 SLC25A44Q96H78 314 aaPredicted RBP5.47□□□□□ -1.53
CASC4-208ENST00000559151 CCDC94Q9BW85 323 aaPredicted RBP5.47□□□□□ -1.53
CASC4-208ENST00000559151 PHLDA3Q9Y5J5 127 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms