RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 DCLRE1BQ9H816 532 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 TAF9BQ9HBM6 251 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 MBNL3Q9NUK0 354 aaKnown RBP10.6□□□□□ -0.71
VPS18-203ENST00000558855 NBEAL2Q6ZNJ1 2754 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 A0A0A6YYD4 124 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 EFCAB10A6NFE3 127 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 AP4M1O00189 453 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 CRTAPO75718 401 aaPredicted RBP10.59□□□□□ -0.71
VPS18-203ENST00000558855 SLC2A2P11168 524 aaPredicted RBP10.59□□□□□ -0.71
VPS18-203ENST00000558855 MYF6P23409 242 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 MYCNOSP40205 109 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 WNT4P56705 351 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 UNC119Q13432 240 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 MORN2Q502X0 79 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 OGFRL1Q5TC84 451 aaPredicted RBP10.59□□□□□ -0.71
VPS18-203ENST00000558855 ASPHD1Q5U4P2 390 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 FOXRED2Q8IWF2 684 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 PACRGLQ8N7B6 248 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 RNF152Q8N8N0 203 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 SETD9Q8NE22 299 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 BPIFB6Q8NFQ5 453 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 GFI1Q99684 422 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 NICN1Q9BSH3 213 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 ZFP57Q9NU63 452 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 CNOT2Q9NZN8 540 aaKnown RBP10.59□□□□□ -0.71
VPS18-203ENST00000558855 GNG12Q9UBI6 72 aa10.59□□□□□ -0.71
VPS18-203ENST00000558855 LSM2Q9Y333 95 aaKnown RBP10.59□□□□□ -0.71
VPS18-203ENST00000558855 G3V318 75 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 CCL24O00175 119 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 PDCD6O75340 191 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 DUS4LO95620 317 aaKnown RBP10.58□□□□□ -0.72
VPS18-203ENST00000558855 VSIG8P0DPA2 414 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 CHATP28329 748 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 OR3A3P47888 321 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 NDPQ00604 133 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 GPR50Q13585 617 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 KIAA0141Q14154 515 aaPredicted RBP10.58□□□□□ -0.72
VPS18-203ENST00000558855 UNQ9370/PRO34162Q6UXP9 181 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 C8orf59Q8N0T1 100 aaPredicted RBP10.58□□□□□ -0.72
VPS18-203ENST00000558855 STX19Q8N4C7 294 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 OR51D1Q8NGF3 324 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 MRPS24Q96EL2 167 aaKnown RBP10.58□□□□□ -0.72
VPS18-203ENST00000558855 NABP2Q9BQ15 211 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 KLK15Q9H2R5 256 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 PLCXD1Q9NUJ7 323 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 CKLFQ9UBR5 152 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 ZNF107Q9UII5 783 aaPredicted RBP10.58□□□□□ -0.72
VPS18-203ENST00000558855 FBXO7Q9Y3I1 522 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 RYR2Q92736 4967 aa10.58□□□□□ -0.72
VPS18-203ENST00000558855 DYNC2H1Q8NCM8 4307 aaKnown RBP10.57□□□□□ -0.72
VPS18-203ENST00000558855 CASQ2O14958 399 aaPredicted RBP10.57□□□□□ -0.72
VPS18-203ENST00000558855 SPINT2O43291 252 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 LANCL1O43813 399 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 IGHG4P01861 327 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 CD1AP06126 327 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 FUT3P21217 361 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 IL3RAP26951 378 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 HTR2CP28335 458 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 RAB25P57735 213 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 SLC35B1P78383 322 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 GPR176Q14439 515 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 PNLIPRP3Q17RR3 467 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 Q3ZCU0 254 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 NKAPLQ5M9Q1 402 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 VAX1Q5SQQ9 334 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 C6orf183Q5T699 404 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 TEX38Q6PEX7 206 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 C6orf201Q7Z4U5 140 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 MYOZ3Q8TDC0 251 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 KCTD7Q96MP8 289 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 HDHD3Q9BSH5 251 aaPredicted RBP10.57□□□□□ -0.72
VPS18-203ENST00000558855 FAAP24Q9BTP7 215 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 ABHD14AQ9BUJ0 271 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 IFI27L2Q9H2X8 130 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 GNB4Q9HAV0 340 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 SPACA1Q9HBV2 294 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 OR2S2Q9NQN1 319 aa10.57□□□□□ -0.72
VPS18-203ENST00000558855 CHCHD3Q9NX63 227 aaKnown RBP10.57□□□□□ -0.72
VPS18-203ENST00000558855 NKX1-2Q9UD57 310 aaPredicted RBP10.57□□□□□ -0.72
VPS18-203ENST00000558855 SAA2-SAA4A0A096LPE2 208 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 FAM90A10PA6NDY2 464 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 FAM90A7PA6NKC0 464 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 FAM90A23PA8MXZ1 464 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 MYL12BO14950 172 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 ATP6V0E1O15342 81 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 SAA2P0DJI9 122 aaPredicted RBP10.56□□□□□ -0.72
VPS18-203ENST00000558855 PSMB8P28062 276 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 PPIFP30405 207 aaKnown RBP10.56□□□□□ -0.72
VPS18-203ENST00000558855 TAS2R43P59537 309 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 QRFPP83859 136 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 FOXE3Q13461 319 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 HMGN3Q15651 99 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 ACSM3Q53FZ2 586 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 C1orf100Q5SVJ3 147 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 CDH26Q8IXH8 852 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 COMMD1Q8N668 190 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 PRR25Q96S07 402 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 RASL11BQ9BPW5 248 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 ZNF251Q9BRH9 671 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 TMED9Q9BVK6 235 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms