RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 RPL23AP62750 156 aaKnown RBP6.38□□□□□ -1.39
TRAF3-205ENST00000558700 C6orf183Q5T699 404 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 DMKNQ6E0U4 476 aaPredicted RBP6.38□□□□□ -1.39
TRAF3-205ENST00000558700 MZT2AQ6P582 158 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 TRAT1Q6PIZ9 186 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 C10orf99Q6UWK7 81 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 ZNF497Q6ZNH5 498 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 JAGN1Q8N5M9 183 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 LINC00311Q8N616 119 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 NKAIN3Q8N8D7 197 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 GHSRQ92847 366 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 ARL11Q969Q4 196 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 MRPS24Q96EL2 167 aaKnown RBP6.38□□□□□ -1.39
TRAF3-205ENST00000558700 TMEM80Q96HE8 168 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 PGLYRP3Q96LB9 341 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 C11orf54Q9H0W9 315 aaPredicted RBP6.38□□□□□ -1.39
TRAF3-205ENST00000558700 BABAM2Q9NXR7 383 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 ZNF581Q9P0T4 197 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 RCC2Q9P258 522 aaKnown RBP6.38□□□□□ -1.39
TRAF3-205ENST00000558700 MRPS28Q9Y2Q9 187 aaKnown RBP6.38□□□□□ -1.39
TRAF3-205ENST00000558700 TRAV8-7A0A075B6U6 113 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 TRAV39A0A0B4J263 110 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 A0A1W2PP11 408 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 A0A1W2PPE3 182 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 MAGEA13PA6NCF6 341 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A10PA6NDY2 464 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A7PA6NKC0 464 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A23PA8MXZ1 464 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 MCRIP1C9JLW8 97 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 C15orf65H3BRN8 121 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 AP4M1O00189 453 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 SPINT2O43291 252 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 RRP9O43818 475 aaKnown RBP6.37□□□□□ -1.39
TRAF3-205ENST00000558700 GPX5O75715 221 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 LALBAP00709 142 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 IGHG2P01859 326 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 REG1BP48304 166 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 SRSF3P84103 164 aaKnown RBP6.37□□□□□ -1.39
TRAF3-205ENST00000558700 DCTN2Q13561 401 aaKnown RBP6.37□□□□□ -1.39
TRAF3-205ENST00000558700 DIAPH2-AS1Q14236 149 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 HNF4GQ14541 408 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 AWAT2Q6E213 333 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 OR2W3Q7Z3T1 314 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 MOB3BQ86TA1 216 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 ZNF329Q86UD4 541 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 TGIF2LXQ8IUE1 241 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 CDH26Q8IXH8 852 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 C8orf59Q8N0T1 100 aaPredicted RBP6.37□□□□□ -1.39
TRAF3-205ENST00000558700 STPG2Q8N412 459 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 DHRSXQ8N5I4 330 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 LINC00482Q8N8I6 264 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 ZFP41Q8N8Y5 198 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 KLHL30-AS1Q8NEE0 82 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 OR2T10Q8NGZ9 312 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 RTN4IP1Q8WWV3 396 aaPredicted RBP6.37□□□□□ -1.39
TRAF3-205ENST00000558700 ORAI1Q96D31 301 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 NOL4LQ96MY1 436 aaPredicted RBP6.37□□□□□ -1.39
TRAF3-205ENST00000558700 OR14A2Q96R54 314 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 MCRIP2Q9BUT9 160 aaKnown RBP6.37□□□□□ -1.39
TRAF3-205ENST00000558700 C1orf43Q9BWL3 253 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 GON7Q9BXV9 100 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 ZFP57Q9NU63 452 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 LIN7CQ9NUP9 197 aaKnown RBP6.37□□□□□ -1.39
TRAF3-205ENST00000558700 ETAA1Q9NY74 926 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 CNOT2Q9NZN8 540 aaKnown RBP6.37□□□□□ -1.39
TRAF3-205ENST00000558700 GNG12Q9UBI6 72 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 CLEC2DQ9UHP7 191 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 TRAPPC2LQ9UL33 140 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 PLA2G2DQ9UNK4 145 aa6.37□□□□□ -1.39
TRAF3-205ENST00000558700 SIRT4Q9Y6E7 314 aaPredicted RBP6.37□□□□□ -1.39
TRAF3-205ENST00000558700 TRBV5-7A0A0A0MS05 114 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 IGHV3-43A0A0B4J1X8 118 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 IGHV3-72A0A0B4J1Y9 119 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 PNMA8CA0A1B0GUJ8 204 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 NCBP2LA6PVI3 153 aaKnown RBP6.36□□□□□ -1.39
TRAF3-205ENST00000558700 C12orf77C9JDV5 145 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 CA11O75493 328 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 MOSP00540 346 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 MT-ND4P03905 459 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 IGHV3-43DP0DP04 118 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 MGMTP16455 207 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 CD1BP29016 333 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 GPR12P47775 334 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 THBS3P49746 956 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 ZNF137PP52743 207 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 WNT4P56705 351 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 RPS11P62280 158 aaKnown RBP eCLIP6.36□□□□□ -1.39
TRAF3-205ENST00000558700 ADARB1P78563 741 aaKnown RBP6.36□□□□□ -1.39
TRAF3-205ENST00000558700 ST3GAL4Q11206 333 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 EBI3Q14213 229 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 RCN1Q15293 331 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 LRRC36Q1X8D7 754 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 RAB12Q6IQ22 244 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 GLIPR1L1Q6UWM5 242 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 SLC25A48Q6ZT89 311 aaKnown RBP6.36□□□□□ -1.39
TRAF3-205ENST00000558700 AHSA2Q719I0 299 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 Q8N6K4 173 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 ZNF485Q8NCK3 441 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 OR8H1Q8NGG4 311 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 UBALD1Q8TB05 177 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms