RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 SPINT2O43291 252 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 HOXA3O43365 443 aaPredicted RBP12.52□□□□□ -0.41
LINC01220-201ENST00000558575 SSX5O60225 188 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 EIF4EP06730 217 aaKnown RBP12.52□□□□□ -0.41
LINC01220-201ENST00000558575 SCTP09683 121 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 ZNF134P52741 427 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 BAMBIQ13145 260 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 TRAT1Q6PIZ9 186 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 LDLRAD3Q86YD5 345 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 IZUMO1Q8IYV9 350 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 PRR18Q8N4B5 295 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 ZNF439Q8NDP4 499 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 BEND2Q8NDZ0 799 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 OR9G1Q8NH87 305 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 SETD6Q8TBK2 473 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 PIFOQ8TCI5 191 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 DYNC2LI1Q8TCX1 351 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 TAF15Q92804 592 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC01220-201ENST00000558575 KCNIP1Q9NZI2 227 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 ZNF230Q9UIE0 474 aaPredicted RBP12.52□□□□□ -0.41
LINC01220-201ENST00000558575 FAM96BQ9Y3D0 163 aa12.52□□□□□ -0.41
LINC01220-201ENST00000558575 TBL2Q9Y4P3 447 aaKnown RBP12.52□□□□□ -0.41
LINC01220-201ENST00000558575 IGKV1D-8A0A087WSZ0 117 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 IGKV1-6A0A0C4DH72 117 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 TMEM235A6NFC5 223 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 DNAJC9-AS1A6NH13 148 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 POM121CA8CG34 1229 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 BUB1B-PAK6H3BSN5 160 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 SLC31A2O15432 143 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 IGHV4-59P01825 116 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 FCGR3AP08637 254 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 GSTP1P09211 210 aaKnown RBP12.51□□□□□ -0.41
LINC01220-201ENST00000558575 FBP1P09467 338 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 CD3GP09693 182 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 PTHLHP12272 177 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 IER3P46695 156 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 LGALS4P56470 323 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 GNMTQ14749 295 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 HLA-DRB5Q30154 266 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 UBE2NLQ5JXB2 153 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 MINOS1Q5TGZ0 78 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 HACD4Q5VWC8 232 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 RBMS3Q6XE24 437 aaKnown RBP12.51□□□□□ -0.41
LINC01220-201ENST00000558575 OR10V1Q8NGI7 309 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 ZNF596Q8TC21 504 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 ACOT12Q8WYK0 555 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 MALSU1Q96EH3 234 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 AUNIPQ9H7T9 357 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 MINOS1-NBL1R4GNA1 71 aa12.51□□□□□ -0.41
LINC01220-201ENST00000558575 A0A0A6YYH2 397 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 A6NJ64 397 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 CLDN34H7C241 214 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 TOR1AO14656 332 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 XRCC3O43542 346 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 HPGDSO60760 199 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 SCGNO76038 276 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 ELK1P19419 428 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 HTR1DP28221 377 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 GNG10P50151 68 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 PRRX1P54821 245 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 HTD2P86397 168 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 ARFRP1Q13795 201 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 DIAPH2-AS1Q14236 149 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 SSX2Q16385 188 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 MORN2Q502X0 79 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 FBLN7Q53RD9 439 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 CT45A1Q5HYN5 189 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 MOB1BQ7L9L4 216 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 LINC00311Q8N616 119 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 CT45A3Q8NHU0 189 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 NUDCD2Q8WVJ2 157 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 MAFIPQ8WZ33 124 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 S100A16Q96FQ6 103 aaKnown RBP12.5□□□□□ -0.41
LINC01220-201ENST00000558575 CMTM3Q96MX0 182 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 MMP28Q9H239 520 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 OR2S2Q9NQN1 319 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 DIABLOQ9NR28 239 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 DPM3Q9P2X0 92 aa12.5□□□□□ -0.41
LINC01220-201ENST00000558575 TRDCB7Z8K6 153 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 HLA-DQB1P01920 261 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 APOA1P02647 267 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 GSTT2P0CG29 244 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 GSTT2BP0CG30 244 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 PPP1CCP36873 323 aaKnown RBP12.49□□□□□ -0.41
LINC01220-201ENST00000558575 RAB13P51153 203 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 HLA-DRB3P79483 266 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 HERPUD1Q15011 391 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 ARL6IP1Q15041 203 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 PNLIPRP3Q17RR3 467 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 C8orf31Q8N9H6 132 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 GALMQ96C23 342 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 PARP12Q9H0J9 701 aaKnown RBP12.49□□□□□ -0.41
LINC01220-201ENST00000558575 MIXL1Q9H2W2 232 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 TNFRSF19Q9NS68 423 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 GNG12Q9UBI6 72 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 HILPDAQ9Y5L2 63 aa12.49□□□□□ -0.41
LINC01220-201ENST00000558575 LEUTXA8MZ59 168 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 CTDSP2O14595 271 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 YPEL1O60688 119 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 SRSF4Q08170 494 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms