RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 BANF2Q9H503 90 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 DUSP21Q9H596 190 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 MOB1AQ9H8S9 216 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 RASL12Q9NYN1 266 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 C1RLQ9NZP8 487 aa3.4□□□□□ -1.87
SPG11-211ENST00000558561 PKD1L1Q8TDX9 2849 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 ANK2Q01484 3957 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 A0A0A6YYD4 124 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 IGHV3-43A0A0B4J1X8 118 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 A0A0B4J203 849 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SMIM30A4D0T7 59 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 TMEM212A6NML5 194 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 DHRS7CA6NNS2 312 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SLC33A1O00400 549 aaPredicted RBP3.39□□□□□ -1.87
SPG11-211ENST00000558561 GEMIN2O14893 280 aaKnown RBP3.39□□□□□ -1.87
SPG11-211ENST00000558561 DEGS1O15121 323 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SULT1B1O43704 296 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 CHST1O43916 411 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 PAGE4O60829 102 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 GPX5O75715 221 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 GATBO75879 557 aaKnown RBP3.39□□□□□ -1.87
SPG11-211ENST00000558561 ECDO95905 644 aaPredicted RBP3.39□□□□□ -1.87
SPG11-211ENST00000558561 HOXB5P09067 269 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 OCM2P0CE71 109 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 IGHV3-43DP0DP04 118 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 IGHV4-30-4P0DP06 118 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SERPINA2P20848 420 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 PCMT1P22061 227 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 GABRR1P24046 479 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 CRHBPP24387 322 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SAA4P35542 130 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 TGFBR1P36897 503 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 PTGFRP43088 359 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 F2RL1P55085 397 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 BRWD1-AS2P59051 145 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 RPS25P62851 125 aaKnown RBP3.39□□□□□ -1.87
SPG11-211ENST00000558561 BLCAPP62952 87 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SLC35A2P78381 396 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 FABP5Q01469 135 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 ATXN7L3Q14CW9 347 aaPredicted RBP3.39□□□□□ -1.87
SPG11-211ENST00000558561 ZNF146Q15072 292 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 GRK1Q15835 563 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 KCNJ8Q15842 424 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SSX1Q16384 188 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SSX2Q16385 188 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 LTC4SQ16873 150 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 ACSM3Q53FZ2 586 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 PRAMEF5Q5TYX0 476 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 GPR157Q5UAW9 335 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 LIPKQ5VXJ0 399 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SLC35E4Q6ICL7 350 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 WDR73Q6P4I2 378 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 IZUMO2Q6UXV1 221 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 C12orf54Q6X4T0 127 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 USP43Q70EL4 1123 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 LYG1Q8N1E2 194 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 FTMTQ8N4E7 242 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 ZNF561Q8N587 486 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 Q8NFD4 153 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 OR5D14Q8NGL3 314 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 OR13A1Q8NGR1 328 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 TNFAIP8L1Q8WVP5 186 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 PP6455Q8WZ26 134 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 TMEM106AQ96A25 262 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SMIM19Q96E16 107 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 DERL3Q96Q80 235 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 ZNF184Q99676 751 aaPredicted RBP3.39□□□□□ -1.87
SPG11-211ENST00000558561 SSX3Q99909 188 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 TMED9Q9BVK6 235 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 SUCNR1Q9BXA5 334 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 CDCA4Q9BXL8 241 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 DNTTIP1Q9H147 329 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 RNF167Q9H6Y7 350 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 PLEKHA1Q9HB21 404 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 ZNF286AQ9HBT8 521 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 NEK6Q9HC98 313 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 INPP5EQ9NRR6 644 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 KIF25Q9UIL4 384 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 EXOSC1Q9Y3B2 195 aaKnown RBP3.39□□□□□ -1.87
SPG11-211ENST00000558561 NOP16Q9Y3C1 178 aaKnown RBP3.39□□□□□ -1.87
SPG11-211ENST00000558561 AK6Q9Y3D8 172 aaKnown RBP3.39□□□□□ -1.87
SPG11-211ENST00000558561 HILPDAQ9Y5L2 63 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 KPTNQ9Y664 436 aa3.39□□□□□ -1.87
SPG11-211ENST00000558561 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 A0A087X0M5 115 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 A0A1B0GX30 115 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 EFCAB10A6NFE3 127 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 NKX6-3A6NJ46 265 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 SNTNA6NMZ2 147 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 ZNF736B4DX44 427 aaPredicted RBP3.38□□□□□ -1.87
SPG11-211ENST00000558561 H0YHG0 523 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 H0YJX3 145 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 H3BUX3 64 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 TRIM77I1YAP6 450 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 M0R1W7 72 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 VCYO14598 125 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 SH2D1BO14796 132 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 SLC31A2O15432 143 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 GPR137BO60478 399 aa3.38□□□□□ -1.87
SPG11-211ENST00000558561 ALDOBP05062 364 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms