RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 OR2S2Q9NQN1 319 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 ZNF69Q9UC07 566 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 OR2W1Q9Y3N9 320 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 KIAA2026Q5HYC2 2103 aa12.25□□□□□ -0.45
VPS18-202ENST00000558474 A0A087X0M5 115 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 A0A096LNT2 108 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 A0A1B0GX30 115 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 C22orf46C9J442 243 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 PHF1O43189 567 aaPredicted RBP12.24□□□□□ -0.45
VPS18-202ENST00000558474 ANKRD17O75179 2603 aaKnown RBP12.24□□□□□ -0.45
VPS18-202ENST00000558474 SLC22A5O76082 557 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 PPYP01298 95 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 CEACAM6P40199 344 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 FASNP49327 2511 aaKnown RBP12.24□□□□□ -0.45
VPS18-202ENST00000558474 CCR6P51684 374 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 HERV-K104P61576 105 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 PAX2Q02962 417 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 MSMO1Q15800 293 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 AADACL3Q5VUY0 350 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 C8orf31Q8N9H6 132 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 OR13C8Q8NGS7 320 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 GFOD1Q9NXC2 390 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 RDH8Q9NYR8 311 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 KPTNQ9Y664 436 aa12.24□□□□□ -0.45
VPS18-202ENST00000558474 CENPEQ02224 2701 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 IGHV2-70DA0A0C4DH43 119 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 FAM172BPA6NC97 362 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 NFYAP23511 347 aaPredicted RBP12.23□□□□□ -0.45
VPS18-202ENST00000558474 ZFP36P26651 326 aaKnown RBP12.23□□□□□ -0.45
VPS18-202ENST00000558474 MECP2P51608 486 aaKnown RBP12.23□□□□□ -0.45
VPS18-202ENST00000558474 MORN2Q502X0 79 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 CCBE1Q6UXH8 406 aaPredicted RBP12.23□□□□□ -0.45
VPS18-202ENST00000558474 KRTAP1-3Q8IUG1 177 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 CENPSQ8N2Z9 138 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 C11orf42Q8N5U0 333 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 RFESDQ8TAC1 157 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 ZFAND1Q8TCF1 268 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 ZNF486Q96H40 463 aaPredicted RBP12.23□□□□□ -0.45
VPS18-202ENST00000558474 MARVELD1Q9BSK0 173 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 UNKLQ9H9P5 680 aaKnown RBP12.23□□□□□ -0.45
VPS18-202ENST00000558474 GNG12Q9UBI6 72 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 SESN1Q9Y6P5 492 aa12.23□□□□□ -0.45
VPS18-202ENST00000558474 OR5H14A6NHG9 310 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 B4DSR2 109 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 IGHV1-8P0DP01 117 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 CCL3L1P16619 93 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 AADACP22760 399 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 GATA3P23771 443 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 CD34P28906 385 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 RAB7AP51149 207 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 LUMP51884 338 aaPredicted RBP12.22□□□□□ -0.45
VPS18-202ENST00000558474 ERVFRD-1P60508 538 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 BTNL3Q6UXE8 466 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 SLC38A6Q8IZM9 456 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 OR52L2PQ8NGH6 319 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 TNFRSF14Q92956 283 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 REG4Q9BYZ8 158 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 ALX4Q9H161 411 aaPredicted RBP12.22□□□□□ -0.45
VPS18-202ENST00000558474 C20orf85Q9H1P6 137 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 OR1A1Q9P1Q5 309 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 GPR132Q9UNW8 380 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 GAB2Q9UQC2 676 aa12.22□□□□□ -0.45
VPS18-202ENST00000558474 SPG11Q96JI7 2443 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 MALRD1Q5VYJ5 2156 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 FAM157AC9JC47 383 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 UBE2MP61081 183 aaKnown RBP12.21□□□□□ -0.45
VPS18-202ENST00000558474 LCN2P80188 198 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 FAHD2BQ6P2I3 314 aaPredicted RBP12.21□□□□□ -0.45
VPS18-202ENST00000558474 C5orf24Q7Z6I8 188 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 LINC00311Q8N616 119 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 ZBTB34Q8NCN2 500 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 OR2AK2Q8NG84 335 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 OR10V1Q8NGI7 309 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 ZNF596Q8TC21 504 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 MRGPRFQ96AM1 343 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 FAHD2AQ96GK7 314 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 AKR1E2Q96JD6 320 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 Q96MF0 132 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 RSRP1Q9BUV0 290 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 METTL8Q9H825 291 aaKnown RBP12.21□□□□□ -0.45
VPS18-202ENST00000558474 NUDT15Q9NV35 164 aa12.21□□□□□ -0.45
VPS18-202ENST00000558474 TRAV20A0A0B4J274 112 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 PRAF2O60831 178 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 DHFRP00374 187 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 CTSDP07339 412 aaPredicted RBP12.2□□□□□ -0.46
VPS18-202ENST00000558474 MSMBP08118 114 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 H2AFB2P0C5Z0 115 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 OMGP23515 440 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 PRTN3P24158 256 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 PPP1CCP36873 323 aaKnown RBP12.2□□□□□ -0.46
VPS18-202ENST00000558474 DVL1P1P54792 670 aaPredicted RBP12.2□□□□□ -0.46
VPS18-202ENST00000558474 TAS2R31P59538 309 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 PRAMEF5Q5TYX0 476 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 LINC01356Q8N9X3 169 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 ZNF439Q8NDP4 499 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 UBALD1Q8TB05 177 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 MARCH1Q8TCQ1 289 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 TMPRSS13Q9BYE2 586 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 FXYD6Q9H0Q3 95 aa12.2□□□□□ -0.46
VPS18-202ENST00000558474 TMEM133Q9H2Q1 129 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms