RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 FABP12A6NFH5 140 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 ODF3BA8MYP8 253 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 J3QR06 171 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 CTDSPLO15194 276 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 FABP7O15540 132 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 ARG1P05089 322 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 LPLP06858 475 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 SCTP09683 121 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 GSTT2P0CG29 244 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 GSTT2BP0CG30 244 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 EPHA1P21709 976 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 ZBTB25P24278 435 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 PTBP1P26599 531 aaKnown RBP eCLIP8.53□□□□□ -1.04
LRRC28-204ENST00000558172 DLX1P56177 255 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 IL18Q14116 193 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 CNPY1Q3B7I2 92 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 MORN2Q502X0 79 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 MINOS1Q5TGZ0 78 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 BRD3OSQ6XYD6 125 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 LINC00299Q6ZSB3 139 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 SNX29P2Q8IUI4 249 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 PDZD9Q8IXQ8 264 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 LINC00311Q8N616 119 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 UBALD1Q8TB05 177 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 GPX8Q8TED1 209 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 IL1F10Q8WWZ1 152 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 IFT46Q9NQC8 304 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 ZNF69Q9UC07 566 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 PSG11Q9UQ72 335 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 MINOS1-NBL1R4GNA1 71 aa8.53□□□□□ -1.04
LRRC28-204ENST00000558172 NIPBLQ6KC79 2804 aaeCLIP8.52□□□□□ -1.05
LRRC28-204ENST00000558172 IGHV3-43A0A0B4J1X8 118 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 MEIOCA2RUB1 952 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 ITGB1BP1O14713 200 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 HSPA12AO43301 675 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 IGLV1-47P01700 117 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 IGHV3-43DP0DP04 118 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 PTHLHP12272 177 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 HTR1DP28221 377 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 SAA4P35542 130 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 CEACAM3P40198 252 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 PRB3Q04118 309 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-204ENST00000558172 HLA-DRB5Q30154 266 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 RUSC1-AS1Q66K80 236 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 LURAP1LQ8IV03 231 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 BEST4Q8NFU0 473 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 OR52L2PQ8NGH6 319 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 OR6Q1Q8NGQ2 317 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 OR10J5Q8NHC4 309 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 FCAMRQ8WWV6 532 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 EDARADDQ8WWZ3 215 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 MAFIPQ8WZ33 124 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 MALSU1Q96EH3 234 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 ABHD1Q96SE0 405 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 SOSTQ9BQB4 213 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 CABLES2Q9BTV7 478 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 TOLLIPQ9H0E2 274 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 MMP28Q9H239 520 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 GHITMQ9H3K2 345 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 ANXA10Q9UJ72 324 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 ANAPC10Q9UM13 185 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 FAM96BQ9Y3D0 163 aa8.52□□□□□ -1.05
LRRC28-204ENST00000558172 AMMECR1Q9Y4X0 333 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-204ENST00000558172 TRBV6-7A0A0A0MS04 114 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 A0A1W2PRD5 423 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 A0A1W2PRF3 423 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 A0A1W2PRM7 423 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 LEUTXA8MZ59 168 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 BUB1B-PAK6H3BSN5 160 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 GABARAPH6UMI1 98 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 RBBP9O75884 186 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 FBP1P09467 338 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 NAT1P18440 290 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 IL3RAP26951 378 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 CEACAM6P40199 344 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 ETV6P41212 452 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 ARPC4P59998 168 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 SSBP1Q04837 148 aaKnown RBP8.51□□□□□ -1.05
LRRC28-204ENST00000558172 SPANXN2Q5MJ10 180 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 FAM131AQ6UXB0 335 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 RBMS3Q6XE24 437 aaKnown RBP8.51□□□□□ -1.05
LRRC28-204ENST00000558172 SLC25A48Q6ZT89 311 aaKnown RBP8.51□□□□□ -1.05
LRRC28-204ENST00000558172 C5orf24Q7Z6I8 188 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 CCDC190Q86UF4 302 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 GVQW1Q8N7I0 195 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 OR10V1Q8NGI7 309 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 OR4P4Q8NGL7 312 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 FAM216AQ8WUB2 273 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 LEAP2Q969E1 77 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 GINS4Q9BRT9 223 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 MEGF9Q9H1U4 602 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 PRDM13Q9H4Q3 707 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 DPM3Q9P2X0 92 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 SLC23A1Q9UHI7 598 aa8.51□□□□□ -1.05
LRRC28-204ENST00000558172 IGKV1D-8A0A087WSZ0 117 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 IGKV1-6A0A0C4DH72 117 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 FAM172BPA6NC97 362 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 MEIS3P1A6NDR6 274 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 OOSP1A8MZH6 123 aa8.5□□□□□ -1.05
LRRC28-204ENST00000558172 BET1O15155 118 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms