RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 JPT1Q9UK76 154 aa7.25□□□□□ -1.25
SPG11-207ENST00000558138 HSF4Q9ULV5 492 aa7.25□□□□□ -1.25
SPG11-207ENST00000558138 MGAT4AQ9UM21 535 aa7.25□□□□□ -1.25
SPG11-207ENST00000558138 RNF114Q9Y508 228 aa7.25□□□□□ -1.25
SPG11-207ENST00000558138 VGLL3A8MV65 326 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 LDLRAD4O15165 306 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 NOL3O60936 208 aaKnown RBP7.24□□□□□ -1.25
SPG11-207ENST00000558138 SCGNO76038 276 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 NDUFA7O95182 113 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 IGLV1-47P01700 117 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 GAPDHP04406 335 aaKnown RBP7.24□□□□□ -1.25
SPG11-207ENST00000558138 FAM106CPP0CH98 169 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 CD37P11049 281 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 HIST1H1DP16402 221 aaKnown RBP7.24□□□□□ -1.25
SPG11-207ENST00000558138 CFPP27918 469 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 PPP1CCP36873 323 aaKnown RBP7.24□□□□□ -1.25
SPG11-207ENST00000558138 TGFBR1P36897 503 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 COMPP49747 757 aaPredicted RBP7.24□□□□□ -1.25
SPG11-207ENST00000558138 GNG2P59768 71 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 HLA-DRB3P79483 266 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 ARL6IP1Q15041 203 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 C9orf152Q5JTZ5 239 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 LDLRAD2Q5SZI1 272 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 UTF1Q5T230 341 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 Q6ZSV7 163 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 GPR141Q7Z602 305 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 ZNF554Q86TJ5 538 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 NR2C2APQ86WQ0 139 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 CROCCP3Q8IVE0 287 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 DTX3Q8N9I9 347 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 OR2AK2Q8NG84 335 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 OR56B4Q8NH76 319 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 YIPF6Q96EC8 236 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 AJUBAQ96IF1 538 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 CYYR1Q96J86 154 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 ABHD14AQ9BUJ0 271 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 FUNDC2Q9BWH2 189 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 LINC00574Q9H8X3 128 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 MBNL3Q9NUK0 354 aaKnown RBP7.24□□□□□ -1.25
SPG11-207ENST00000558138 FBLN5Q9UBX5 448 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 COL6A5A8TX70 2615 aa7.24□□□□□ -1.25
SPG11-207ENST00000558138 POM121CA8CG34 1229 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 SERPINE3A8MV23 424 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 TIMM23O14925 209 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 SLC31A2O15432 143 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 SNRNP70P08621 437 aaKnown RBP7.23□□□□□ -1.25
SPG11-207ENST00000558138 TMEM11P17152 192 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 ZBTB25P24278 435 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 DYNLT3P51808 116 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 VBP1P61758 197 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 HTD2P86397 168 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 RELBQ01201 579 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 HNF4GQ14541 408 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 GNMTQ14749 295 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 HMGN3Q15651 99 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 MOGAT2Q3SYC2 334 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 PLAC9Q5JTB6 97 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 STEAP3Q658P3 488 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 FAM53AQ6NSI3 398 aaPredicted RBP7.23□□□□□ -1.25
SPG11-207ENST00000558138 SHISA2Q6UWI4 295 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 TGIF2LXQ8IUE1 241 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 OR8H3Q8N146 312 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 FAM89BQ8N5H3 189 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 DRAM1Q8N682 238 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 PTX4Q96A99 478 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 OCSTAMPQ9BR26 566 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 GINS4Q9BRT9 223 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 SLC25A33Q9BSK2 321 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 PRSS22Q9GZN4 317 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 RANBP3Q9H6Z4 567 aaPredicted RBP7.23□□□□□ -1.25
SPG11-207ENST00000558138 RHBDL2Q9NX52 303 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 RBM7Q9Y580 266 aaKnown RBP7.23□□□□□ -1.25
SPG11-207ENST00000558138 ETV7Q9Y603 341 aa7.23□□□□□ -1.25
SPG11-207ENST00000558138 IGHV3-72A0A0B4J1Y9 119 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 A6NDX4 124 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 TRDCB7Z8K6 153 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 BET1O15155 118 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 ST8SIA5O15466 376 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 TXNL1O43396 289 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 CHST1O43916 411 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 NAPSAO96009 420 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 IGKV1D-33P01593 117 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 IGKV1-33P01594 117 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 FCGR3AP08637 254 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 SCTP09683 121 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 SMIM18P0DKX4 95 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 VSIG10L2P0DP72 767 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 CEACAM6P40199 344 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 KIR2DS4P43632 304 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 VDAC2P45880 294 aaPredicted RBP7.22□□□□□ -1.25
SPG11-207ENST00000558138 TMEM50BP56557 158 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 LOXL3P58215 753 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 DIAPH2-AS1Q14236 149 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 KIR2DS1Q14954 304 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 Q3ZCU0 254 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 CDNFQ49AH0 187 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 MORN2Q502X0 79 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 GPR107Q5VW38 600 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 C16orf82Q7Z2V1 217 aa7.22□□□□□ -1.25
SPG11-207ENST00000558138 C5orf24Q7Z6I8 188 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms