RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ZDHHC22Q8N966 263 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 OR13C8Q8NGS7 320 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 FAM216AQ8WUB2 273 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 EDARADDQ8WWZ3 215 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 CREB3L1Q96BA8 519 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 YPEL2Q96QA6 119 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 FOXC2Q99958 501 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 TMPRSS13Q9BYE2 586 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 TOLLIPQ9H0E2 274 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 C20orf85Q9H1P6 137 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 NUDT15Q9NV35 164 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 GFOD1Q9NXC2 390 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 ONECUT1Q9UBC0 465 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 POLR3KQ9Y2Y1 108 aaPredicted RBP13.88□□□□□ -0.19
SNX1-203ENST00000558040 OR2W1Q9Y3N9 320 aa13.88□□□□□ -0.19
SNX1-203ENST00000558040 FBN2P35556 2912 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 IGHV3-43A0A0B4J1X8 118 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 OR5H14A6NHG9 310 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 C17orf98A8MV24 154 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 M0R1W7 72 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 IGHV3-43DP0DP04 118 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 PGAM2P15259 253 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 SPNP16150 400 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 NFYBP25208 207 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 ZFP36P26651 326 aaKnown RBP13.87□□□□□ -0.19
SNX1-203ENST00000558040 PPP1CCP36873 323 aaKnown RBP13.87□□□□□ -0.19
SNX1-203ENST00000558040 LOXL3P58215 753 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 FXYD4P59646 89 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 AADACL3Q5VUY0 350 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 LPCAT3Q6P1A2 487 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 GLCCI1Q86VQ1 547 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 KIR3DL3Q8N743 410 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 OR10V1Q8NGI7 309 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 ZFAND1Q8TCF1 268 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 MMP28Q9H239 520 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 RBM7Q9Y580 266 aaKnown RBP13.87□□□□□ -0.19
SNX1-203ENST00000558040 KIAA2026Q5HYC2 2103 aa13.87□□□□□ -0.19
SNX1-203ENST00000558040 IGHV2-70DA0A0C4DH43 119 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 RLN1P04808 185 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 H2AFB2P0C5Z0 115 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 LUMP51884 338 aaPredicted RBP13.86□□□□□ -0.19
SNX1-203ENST00000558040 UCP3P55916 312 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 LOXL1Q08397 574 aaPredicted RBP13.86□□□□□ -0.19
SNX1-203ENST00000558040 GNMTQ14749 295 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 Q3ZCU0 254 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 MORN2Q502X0 79 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 LY6G6FQ5SQ64 297 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 BTNL3Q6UXE8 466 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 MARCH1Q8TCQ1 289 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 TOMM40LQ969M1 308 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 UPRTQ96BW1 309 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 Q96MF0 132 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 MARVELD1Q9BSK0 173 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 FXYD6Q9H0Q3 95 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 C14orf166Q9Y224 244 aaKnown RBP13.86□□□□□ -0.19
SNX1-203ENST00000558040 SESN1Q9Y6P5 492 aa13.86□□□□□ -0.19
SNX1-203ENST00000558040 MALRD1Q5VYJ5 2156 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 TRAV6A0A075B6T7 132 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 FAM157AC9JC47 383 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 ITGB1BP1O14713 200 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 ARPC1BO15143 372 aaKnown RBP13.85□□□□□ -0.19
SNX1-203ENST00000558040 IGHV1-8P0DP01 117 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 RAG2P55895 527 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 ERVFRD-1P60508 538 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 KRTAP1-3Q8IUG1 177 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 SLC38A6Q8IZM9 456 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 OR2AK2Q8NG84 335 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 MRGPRFQ96AM1 343 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 REG4Q9BYZ8 158 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 SLC5A7Q9GZV3 580 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 KPTNQ9Y664 436 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 DOCK11Q5JSL3 2073 aa13.85□□□□□ -0.19
SNX1-203ENST00000558040 A0A096LNT2 108 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 B4DSR2 109 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 INMT-MINDY4F8WBC2 141 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 PEX14O75381 377 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 MMP23AO75900 390 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 DHFRP00374 187 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 RAB7AP51149 207 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 PAX2Q02962 417 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 C1orf122Q6ZSJ8 110 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 SECTM1Q8WVN6 248 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 ZNF486Q96H40 463 aaPredicted RBP13.84□□□□□ -0.19
SNX1-203ENST00000558040 C1orf159Q96HA4 380 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 SUCNR1Q9BXA5 334 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 METTL8Q9H825 291 aaKnown RBP13.84□□□□□ -0.19
SNX1-203ENST00000558040 GPR132Q9UNW8 380 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 VSIG4Q9Y279 399 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 CRYBG3Q68DQ2 2970 aa13.84□□□□□ -0.19
SNX1-203ENST00000558040 A0A087X0M5 115 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 A0A1B0GX30 115 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 RNF223E7ERA6 249 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 SLC22A5O76082 557 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 CTSDP07339 412 aaPredicted RBP13.83□□□□□ -0.2
SNX1-203ENST00000558040 MSMBP08118 114 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 OR8U9P0C7N5 309 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 S100GP29377 79 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 TAS2R31P59538 309 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 ARF6P62330 175 aa13.83□□□□□ -0.2
SNX1-203ENST00000558040 BAMBIQ13145 260 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms