RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PLA2G7Q13093 441 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 MADCAM1Q13477 382 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 ARFRP1Q13795 201 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 MOGAT2Q3SYC2 334 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 RUSC1-AS1Q66K80 236 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 PDZD9Q8IXQ8 264 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 SAMD12Q8N8I0 201 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 OR4P4Q8NGL7 312 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 OR4A4PQ8NGN8 299 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 OR5H6Q8NGV6 325 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 EDARADDQ8WWZ3 215 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 ZNF48Q96MX3 618 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-234ENST00000557703 NAA50Q9GZZ1 169 aaKnown RBP11.11□□□□□ -0.63
SHMT2-234ENST00000557703 RAB18Q9NP72 206 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 OR2S2Q9NQN1 319 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 CCDC59Q9P031 241 aaKnown RBP11.11□□□□□ -0.63
SHMT2-234ENST00000557703 PITPNC1Q9UKF7 332 aa11.11□□□□□ -0.63
SHMT2-234ENST00000557703 TXNL1O43396 289 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 RAB7AP51149 207 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 ZNF137PP52743 207 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 GNG2P59768 71 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 HLA-DRB3P79483 266 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 LRRC75BQ2VPJ9 315 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 C16orf87Q6PH81 154 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 SLC25A48Q6ZT89 311 aaKnown RBP11.1□□□□□ -0.63
SHMT2-234ENST00000557703 ZDHHC22Q8N966 263 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 OR10X1Q8NGY0 326 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 NDNFQ8TB73 568 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 ISOC1Q96CN7 298 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 AJUBAQ96IF1 538 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 TOLLIPQ9H0E2 274 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 ZNF286AQ9HBT8 521 aa11.1□□□□□ -0.63
SHMT2-234ENST00000557703 A0A075B6Q4 140 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 MEX3AA1L020 520 aaKnown RBP11.09□□□□□ -0.63
SHMT2-234ENST00000557703 LY6LH3BQJ8 138 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 VENTXO95231 258 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 FCGR3AP08637 254 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 GDNFP39905 211 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 UBA52P62987 128 aaKnown RBP11.09□□□□□ -0.63
SHMT2-234ENST00000557703 SLC9A3R2Q15599 337 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 MORN2Q502X0 79 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 OR8H3Q8N146 312 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 DYNC2LI1Q8TCX1 351 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 ABCB10Q9NRK6 738 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 COMMD3Q9UBI1 195 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 ADAM30Q9UKF2 790 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 CEPT1Q9Y6K0 416 aa11.09□□□□□ -0.63
SHMT2-234ENST00000557703 TRAV18A0A075B6X5 111 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 TRAV39A0A0B4J263 110 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 DNAJC9-AS1A6NH13 148 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 H3BMQ9 156 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 HOXA3O43365 443 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-234ENST00000557703 GAPDHP04406 335 aaKnown RBP11.08□□□□□ -0.64
SHMT2-234ENST00000557703 DLX1P56177 255 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 SSX2Q16385 188 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 TMEM69Q5SWH9 247 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 FAM71F2Q6NXP2 309 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 THNSL2Q86YJ6 484 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 PRR18Q8N4B5 295 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 OR2AK2Q8NG84 335 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 OR1L1Q8NH94 360 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 RPEQ96AT9 228 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 SSX3Q99909 188 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 CABLES2Q9BTV7 478 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 AUNIPQ9H7T9 357 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 RSL24D1Q9UHA3 163 aaKnown RBP11.08□□□□□ -0.64
SHMT2-234ENST00000557703 VPREB3Q9UKI3 123 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 A3GALT2U3KPV4 340 aa11.08□□□□□ -0.64
SHMT2-234ENST00000557703 A0A1B0GUS0 222 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 A0A1W2PRD5 423 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 A0A1W2PRF3 423 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 A0A1W2PRM7 423 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 SULT1C2O00338 296 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 FABP7O15540 132 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 HSPA12AO43301 675 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 ZNF816Q0VGE8 651 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-234ENST00000557703 SPCS2Q15005 226 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 TPTE2P1Q5T6R2 138 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 BAIAP2L2Q6UXY1 529 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 C16orf82Q7Z2V1 217 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 LHFPL4Q7Z7J7 247 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 ZNF439Q8NDP4 499 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 SETD6Q8TBK2 473 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 IL1F10Q8WWZ1 152 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 DGCR14Q96DF8 476 aaKnown RBP11.07□□□□□ -0.64
SHMT2-234ENST00000557703 SCPEP1Q9HB40 452 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 PIPOXQ9P0Z9 390 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 CUBNO60494 3623 aa11.07□□□□□ -0.64
SHMT2-234ENST00000557703 TRBV6-7A0A0A0MS04 114 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 TMEM235A6NFC5 223 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 CRYBA1P05813 215 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 PRSS3P35030 304 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 HABP2Q14520 560 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-234ENST00000557703 OLFML2AQ68BL7 652 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 CNIH2Q6PI25 160 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 OR10J5Q8NHC4 309 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 TOMM40LQ969M1 308 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 AKR1E2Q96JD6 320 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 HDHD3Q9BSH5 251 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-234ENST00000557703 ABHD14AQ9BUJ0 271 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms