RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CHMP1AQ9HD42 196 aaPredicted RBP10.06□□□□□ -0.8
SLIRP-211ENST00000557623 ABRACLQ9P1F3 81 aa10.06□□□□□ -0.8
SLIRP-211ENST00000557623 GNG12Q9UBI6 72 aa10.06□□□□□ -0.8
SLIRP-211ENST00000557623 MGAT4AQ9UM21 535 aa10.06□□□□□ -0.8
SLIRP-211ENST00000557623 RNF114Q9Y508 228 aa10.06□□□□□ -0.8
SLIRP-211ENST00000557623 TRBV6-6A0A0A6YYG2 114 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 LOC100506127A0A0U1RQW1 187 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 METTL21EPA6NDL7 271 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 FOXI3A8MTJ6 420 aaPredicted RBP10.05□□□□□ -0.8
SLIRP-211ENST00000557623 IGHV3-7P01780 117 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 RPLP1P05386 114 aaKnown RBP10.05□□□□□ -0.8
SLIRP-211ENST00000557623 LPLP06858 475 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 IL3RAP26951 378 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 RAB7AP51149 207 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 HTD2P86397 168 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 UTF1Q5T230 341 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 MOB1BQ7L9L4 216 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 C16orf82Q7Z2V1 217 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 OR1L1Q8NH94 360 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 LINC01006Q8NI28 216 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 UBALD1Q8TB05 177 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 GALMQ96C23 342 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 JPT1Q9UK76 154 aa10.05□□□□□ -0.8
SLIRP-211ENST00000557623 IGHV3-43A0A0B4J1X8 118 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 RGS11O94810 467 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 NAPSAO96009 420 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 IGHV3-43DP0DP04 118 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 JUNBP17275 347 aaPredicted RBP10.04□□□□□ -0.8
SLIRP-211ENST00000557623 SDC2P34741 201 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 KIR2DS4P43632 304 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 TMEM50BP56557 158 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 MRPS15P82914 257 aaKnown RBP10.04□□□□□ -0.8
SLIRP-211ENST00000557623 HMGN3Q15651 99 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 STEAP3Q658P3 488 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 ZNF880Q6PDB4 577 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 C11orf88Q6PI97 169 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 CCBE1Q6UXH8 406 aaPredicted RBP10.04□□□□□ -0.8
SLIRP-211ENST00000557623 NR2C2APQ86WQ0 139 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 OR8H3Q8N146 312 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 SETD6Q8TBK2 473 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 CAPSLQ8WWF8 208 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 RAB3CQ96E17 227 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 ARHGAP5-AS1Q96IT6 56 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 AKR1E2Q96JD6 320 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 CMSS1Q9BQ75 279 aaKnown RBP10.04□□□□□ -0.8
SLIRP-211ENST00000557623 PECRQ9BY49 303 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 OR2S2Q9NQN1 319 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 AK3Q9UIJ7 227 aa10.04□□□□□ -0.8
SLIRP-211ENST00000557623 A0A1W2PPE3 182 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 SMIM30A4D0T7 59 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 TRIM64CA6NLI5 447 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 CHST1O43916 411 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 YPEL1O60688 119 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 TMEM127O75204 238 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 GAPDHP04406 335 aaKnown RBP10.03□□□□□ -0.8
SLIRP-211ENST00000557623 FAM106CPP0CH98 169 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 SLC2A2P11168 524 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-211ENST00000557623 SCAND1P57086 179 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 ZNF816Q0VGE8 651 aaPredicted RBP10.03□□□□□ -0.8
SLIRP-211ENST00000557623 ARL6IP1Q15041 203 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 MORN2Q502X0 79 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 LY6G6FQ5SQ64 297 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 SFXN4Q6P4A7 337 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 SLC25A48Q6ZT89 311 aaKnown RBP10.03□□□□□ -0.8
SLIRP-211ENST00000557623 TMEM219Q86XT9 240 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 THNSL2Q86YJ6 484 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 OR10V1Q8NGI7 309 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 OR10R2Q8NGX6 335 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 OR2T6Q8NHC8 308 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 WFDC12Q8WWY7 111 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 YIPF6Q96EC8 236 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 CENPOQ9BU64 300 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 C12orf4Q9NQ89 552 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 DAPK2Q9UIK4 370 aa10.03□□□□□ -0.8
SLIRP-211ENST00000557623 A0A0B4J203 849 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 SERPINE3A8MV23 424 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 HSD17B6O14756 317 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 TXNL1O43396 289 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 AIREO43918 545 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 SCGNO76038 276 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 CD3GP09693 182 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 EFNB2P52799 333 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 PROK1P58294 105 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 MXD1Q05195 221 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 PLA2G7Q13093 441 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 PLAC9Q5JTB6 97 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 C8orf86Q6ZUL3 223 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 CROCCP3Q8IVE0 287 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 ZNF439Q8NDP4 499 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 OR52L2PQ8NGH6 319 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 SGMS2Q8NHU3 365 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 CYYR1Q96J86 154 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 RBM14Q96PK6 669 aaKnown RBP10.02□□□□□ -0.81
SLIRP-211ENST00000557623 PRSS22Q9GZN4 317 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 ATG5Q9H1Y0 275 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 RNF167Q9H6Y7 350 aa10.02□□□□□ -0.81
SLIRP-211ENST00000557623 STAB1Q9NY15 2570 aa10.01□□□□□ -0.81
SLIRP-211ENST00000557623 A0A1W2PPI3 338 aa10.01□□□□□ -0.81
SLIRP-211ENST00000557623 FAM90A9PA6NNJ1 464 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms