RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ZNF367Q7RTV3 350 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 ZNF439Q8NDP4 499 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 OR52M1Q8NGK5 317 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 OR1L6Q8NGR2 347 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 GRPEL2Q8TAA5 225 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 GNPDA2Q8TDQ7 276 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 RFT1Q96AA3 541 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 NDUFAF3Q9BU61 184 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 SCRT1Q9BWW7 348 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 TSSK6Q9BXA6 273 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 CHST5Q9GZS9 411 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 HRH4Q9H3N8 390 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 NCOR1P1Q9H4R4 102 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 FAM118AQ9NWS6 357 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 MLXQ9UH92 298 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 LAMP5Q9UJQ1 280 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 LRP2P98164 4655 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 TRAV24A0A0B4J272 114 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 H0YJX3 145 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 C15orf65H3BRN8 121 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 RGS13O14921 159 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 RBMXL2O75526 392 aaKnown RBP6.82□□□□□ -1.32
NEDD1-211ENST00000557454 GADD45GO95257 159 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 CA2P00918 260 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 RBP2P50120 134 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 ATP1B3P54709 279 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 SF3A3Q12874 501 aaKnown RBP eCLIP6.82□□□□□ -1.32
NEDD1-211ENST00000557454 PDZK1IP1Q13113 114 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 SPATS1Q496A3 300 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 CT45A1Q5HYN5 189 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 Q6ZSR3 168 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 KCTD20Q7Z5Y7 419 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 ELMOD2Q8IZ81 293 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 OR10V1Q8NGI7 309 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 OR4A5Q8NH83 315 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 CT45A3Q8NHU0 189 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 ARL11Q969Q4 196 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 C7orf34Q96L11 122 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 MROQ9BYG7 248 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 ARMC1Q9NVT9 282 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 IL20Q9NYY1 176 aa6.82□□□□□ -1.32
NEDD1-211ENST00000557454 LRP1Q07954 4544 aaKnown RBP6.82□□□□□ -1.32
NEDD1-211ENST00000557454 E2F6O75461 281 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 SRSF10O75494 262 aaKnown RBP6.81□□□□□ -1.32
NEDD1-211ENST00000557454 KDM4BO94953 1096 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 IFNA21P01568 189 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 IFNA17P01571 189 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 CBLN1P23435 193 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 IFNGR2P38484 337 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 XGP55808 180 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 MTCP1P56278 107 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 MED22Q15528 200 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 ODF4Q2M2E3 257 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 SAMD4BQ5PRF9 694 aaKnown RBP6.81□□□□□ -1.32
NEDD1-211ENST00000557454 DEGS2Q6QHC5 323 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 BTNL8Q6UX41 500 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 PLEKHG7Q6ZR37 379 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 ZNF767PQ75MW2 155 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 OR2T33Q8NG76 320 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 OR5D18Q8NGL1 313 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 C16orf45Q96MC5 204 aaPredicted RBP6.81□□□□□ -1.32
NEDD1-211ENST00000557454 CHRDL1Q9BU40 450 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 MOB1AQ9H8S9 216 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 CMC2Q9NRP2 79 aa6.81□□□□□ -1.32
NEDD1-211ENST00000557454 DEFB131BA0A096LNP1 70 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 IGKV1-9A0A0C4DH69 117 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 APOL3O95236 402 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 SOX14O95416 240 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 HLA-AP01891 365 aaKnown RBP6.8□□□□□ -1.32
NEDD1-211ENST00000557454 SCTP09683 121 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 NCK1P16333 377 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 CCL1P22362 96 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 OR3A3P47888 321 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 RIDAP52758 137 aaKnown RBP6.8□□□□□ -1.32
NEDD1-211ENST00000557454 ODF3L2Q3SX64 289 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 Q3ZCU0 254 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 ZNF562Q6V9R5 426 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 ZNF679Q8IYX0 411 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 Q8NAQ8 132 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 OR9Q2Q8NGE9 314 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 OR5B3Q8NH48 314 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 KCNG3Q8TAE7 436 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 THRSPQ92748 146 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 USMG5Q96IX5 58 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 TMEM109Q9BVC6 243 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 OR52A1Q9UKL2 312 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 IKZF2Q9UKS7 526 aa6.8□□□□□ -1.32
NEDD1-211ENST00000557454 KRTAP9-6A0A140TA67 174 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 TMEM213A2RRL7 107 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 MPTX1A8MV57 137 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 MRASO14807 208 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 GSTA4O15217 222 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 SMIM11AP58511 58 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 PAX5Q02548 391 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 ROM1Q03395 351 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 EXOSC2Q13868 293 aaKnown RBP6.79□□□□□ -1.32
NEDD1-211ENST00000557454 FAM131AQ6UXB0 335 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 RASSF6Q6ZTQ3 369 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 SLC38A6Q8IZM9 456 aa6.79□□□□□ -1.32
NEDD1-211ENST00000557454 C6orf223Q8N319 242 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms