RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 OR56B2PQ8NGI1 322 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 OR51A7Q8NH64 312 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 PFN4Q8NHR9 129 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 LZICQ8WZA0 190 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 RGP1Q92546 391 aaPredicted RBP2.68□□□□□ -1.98
CHD8-212ENST00000557329 DCUN1D4Q92564 292 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 RBM14Q96PK6 669 aaKnown RBP2.68□□□□□ -1.98
CHD8-212ENST00000557329 GAFA1Q96PS6 74 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 MICU1Q9BPX6 476 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 TMEM43Q9BTV4 400 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 PARD6BQ9BYG5 372 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 TSPYL1Q9H0U9 437 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 TPT1P8Q9HAU6 139 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 GLS2Q9UI32 602 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 ABCA13Q86UQ4 5058 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 ALMS1Q8TCU4 4167 aa2.68□□□□□ -1.98
CHD8-212ENST00000557329 TRAV27A0A087WT01 109 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 PRORSD1PA6NEY8 169 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 A6NIZ1 184 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 RFPL4AA6NLU0 287 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 SRRM4A7MD48 611 aaKnown RBP2.67□□□□□ -1.98
CHD8-212ENST00000557329 CENPBD1B2RD01 187 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 RFPL4AL1F8VTS6 287 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 M0QZK8 103 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 CHP2O43745 196 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 OR7A10O76100 309 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 OR2F2O95006 317 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 ASAH2BP0C7U1 165 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 RBMY1CP0DJD4 496 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 SLC2A1P11166 492 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 IFI30P13284 250 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 VDAC1P21796 283 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 OR1E2P47887 323 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 CAV3P56539 151 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 TAS2R41P59536 307 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 RAP1BP61224 184 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 RAP1AP62834 184 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 PITPNAQ00169 270 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 CDK6Q00534 326 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 ZNF616Q08AN1 781 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 EDDM3AQ14507 147 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 AGBL2Q5U5Z8 902 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 STUMQ69YW2 141 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 ASRGL1Q7L266 308 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 TSEN54Q7Z6J9 526 aaKnown RBP2.67□□□□□ -1.98
CHD8-212ENST00000557329 LCA5Q86VQ0 697 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 RBM45Q8IUH3 476 aaKnown RBP2.67□□□□□ -1.98
CHD8-212ENST00000557329 C4orf33Q8N1A6 199 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 STPG2Q8N412 459 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 COMMD1Q8N668 190 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 ASCC1Q8N9N2 400 aaKnown RBP2.67□□□□□ -1.98
CHD8-212ENST00000557329 FNDC8Q8TC99 324 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 PIGCQ92535 297 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 ARPC1AQ92747 370 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 C12orf43Q96C57 262 aaKnown RBP2.67□□□□□ -1.98
CHD8-212ENST00000557329 RNF170Q96K19 258 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 C9orf85Q96MD7 179 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 ZIM3Q96PE6 472 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 ALG12Q9BV10 488 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 GON7Q9BXV9 100 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 ALX4Q9H161 411 aaPredicted RBP2.67□□□□□ -1.98
CHD8-212ENST00000557329 GRPEL1Q9HAV7 217 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 CENPMQ9NSP4 180 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 THUMPD1Q9NXG2 353 aaKnown RBP2.67□□□□□ -1.98
CHD8-212ENST00000557329 DPM3Q9P2X0 92 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 BTNL2Q9UIR0 455 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 EMCNQ9ULC0 261 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 PYCARDQ9ULZ3 195 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 HSPE1-MOB4S4R3N1 261 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 KMT2AQ03164 3969 aa2.67□□□□□ -1.98
CHD8-212ENST00000557329 TRAPPC13A5PLN9 417 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 FAM183AA6NL82 134 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 ZNF850A8MQ14 1090 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 LEUTXA8MZ59 168 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 M0R135 149 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 ZSCAN12O43309 604 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 PLIN3O60664 434 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 SPAG7O75391 227 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 PTBP3O95758 552 aaKnown RBP2.66□□□□□ -1.98
CHD8-212ENST00000557329 IFNA4P05014 189 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 FGF4P08620 206 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 ACSM4P0C7M7 580 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 TROVE2P10155 538 aaKnown RBP eCLIP2.66□□□□□ -1.98
CHD8-212ENST00000557329 PSG2P11465 335 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 ZNF823P16415 610 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 ALDH3A1P30838 453 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 PRDX2P32119 198 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 CEACAM3P40198 252 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 PRKXP51817 358 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 RGNQ15493 299 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 GLYATL3Q5SZD4 288 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 LDLRAD2Q5SZI1 272 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 MINOS1Q5TGZ0 78 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 LGALS9CQ6DKI2 356 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 CGB2Q6NT52 195 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 REEP3Q6NUK4 255 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 TIFABQ6ZNK6 161 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 LINC00336Q6ZUF6 198 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 CCDC80Q76M96 950 aa2.66□□□□□ -1.98
CHD8-212ENST00000557329 GDPD3Q7L5L3 318 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms