RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 BANF2Q9H503 90 aa12.47□□□□□ -0.41
TUBB3-213ENST00000557262 RAMP3O60896 148 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 SC5DO75845 299 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 MGMTP16455 207 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 RCC1P18754 421 aaPredicted RBP12.46□□□□□ -0.41
TUBB3-213ENST00000557262 SOX6P35712 828 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 CAPGP40121 348 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 ADARB1P78563 741 aaKnown RBP12.46□□□□□ -0.41
TUBB3-213ENST00000557262 LRRC36Q1X8D7 754 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 MORN2Q502X0 79 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 LCNL1Q6ZST4 164 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 DHRSXQ8N5I4 330 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 FAM71E2Q8N5Q1 922 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 OR10V1Q8NGI7 309 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 OR8U1Q8NH10 309 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 OR1L1Q8NH94 360 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 TAF9BQ9HBM6 251 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 OR2S2Q9NQN1 319 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.46□□□□□ -0.41
TUBB3-213ENST00000557262 C8orf4Q9NR00 106 aa12.46□□□□□ -0.41
TUBB3-213ENST00000557262 KMT2CQ8NEZ4 4911 aaKnown RBP12.46□□□□□ -0.42
TUBB3-213ENST00000557262 UBE2QL1A1L167 161 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 EFCAB10A6NFE3 127 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 LANCL1O43813 399 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 CRTAPO75718 401 aaPredicted RBP12.45□□□□□ -0.42
TUBB3-213ENST00000557262 IGHG4P01861 327 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 CD1AP06126 327 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 RAB25P57735 213 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 DOC2BQ14184 412 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 LYPD6Q86Y78 171 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 PACRGLQ8N7B6 248 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 DERL3Q96Q80 235 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 HSPB9Q9BQS6 159 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 KCNIP1Q9NZI2 227 aa12.45□□□□□ -0.42
TUBB3-213ENST00000557262 PNMA8CA0A1B0GUJ8 204 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 IGF1P05019 195 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 CELP19835 753 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 VDAC1P21796 283 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 CFHR3Q02985 330 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 SIGIRRQ6IA17 410 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 ZNF554Q86TJ5 538 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 OR5M8Q8NGP6 311 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 TFAP2CQ92754 450 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 RBMXL1Q96E39 390 aaKnown RBP12.44□□□□□ -0.42
TUBB3-213ENST00000557262 Q96M66 194 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 CHCHD6Q9BRQ6 235 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 MBNL3Q9NUK0 354 aaKnown RBP12.44□□□□□ -0.42
TUBB3-213ENST00000557262 CNOT2Q9NZN8 540 aaKnown RBP12.44□□□□□ -0.42
TUBB3-213ENST00000557262 ZNF580Q9UK33 172 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 NBEAL2Q6ZNJ1 2754 aa12.44□□□□□ -0.42
TUBB3-213ENST00000557262 OR5H8P0DN80 308 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 LSAMPQ13449 338 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 DEFB136Q30KP8 78 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 C9orf66Q5T8R8 295 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 NKAIN3Q8N8D7 197 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 OR52L2PQ8NGH6 319 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 THRSPQ92748 146 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 KCTD7Q96MP8 289 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 UQCC2Q9BRT2 126 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 GHRLQ9UBU3 117 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 ZNF107Q9UII5 783 aaPredicted RBP12.43□□□□□ -0.42
TUBB3-213ENST00000557262 LRRC42Q9Y546 428 aa12.43□□□□□ -0.42
TUBB3-213ENST00000557262 YPEL1O60688 119 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 PDCD6O75340 191 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 MAPK3P27361 379 aaPredicted RBP12.42□□□□□ -0.42
TUBB3-213ENST00000557262 PSMB8P28062 276 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 WNT4P56705 351 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 HTD2P86397 168 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 MMDQ15546 238 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 MRPL30Q8TCC3 161 aaKnown RBP12.42□□□□□ -0.42
TUBB3-213ENST00000557262 C4orf3Q8WVX3 66 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 WWC2-AS2Q96NR7 200 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 YPEL2Q96QA6 119 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 PLCXD1Q9NUJ7 323 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 PSORS1C1Q9UIG5 152 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 JPT1Q9UK76 154 aa12.42□□□□□ -0.42
TUBB3-213ENST00000557262 MYL12BO14950 172 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 RGS11O94810 467 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 SLC2A2P11168 524 aaPredicted RBP12.41□□□□□ -0.42
TUBB3-213ENST00000557262 LUMP51884 338 aaPredicted RBP12.41□□□□□ -0.42
TUBB3-213ENST00000557262 GNMTQ14749 295 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 LY6G6FQ5SQ64 297 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 LAIR2Q6ISS4 152 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 C5orf24Q7Z6I8 188 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 ODF3L1Q8IXM7 274 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 C8orf59Q8N0T1 100 aaPredicted RBP12.41□□□□□ -0.42
TUBB3-213ENST00000557262 NANOGP1Q8N7R0 232 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 FAM46BQ96A09 425 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 GALMQ96C23 342 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 ABHD14AQ9BUJ0 271 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 CST11Q9H112 138 aa12.41□□□□□ -0.42
TUBB3-213ENST00000557262 NHLRC4P0CG21 123 aaPredicted RBP12.4□□□□□ -0.42
TUBB3-213ENST00000557262 UBBP0CG47 229 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 MYF6P23409 242 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 PPIFP30405 207 aaKnown RBP12.4□□□□□ -0.42
TUBB3-213ENST00000557262 PPP1CCP36873 323 aaKnown RBP12.4□□□□□ -0.42
TUBB3-213ENST00000557262 ACTBP60709 375 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 TMEM65Q6PI78 240 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 AHSA2Q719I0 299 aa12.4□□□□□ -0.42
TUBB3-213ENST00000557262 BPIFB6Q8NFQ5 453 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms