RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 PTAFRP25105 342 aa13.05□□□□□ -0.32
TMEM55B-207ENST00000557041 HLA-DRB3P79483 266 aa13.05□□□□□ -0.32
TMEM55B-207ENST00000557041 IL13RA2Q14627 380 aa13.05□□□□□ -0.32
TMEM55B-207ENST00000557041 DMBX1Q8NFW5 382 aa13.05□□□□□ -0.32
TMEM55B-207ENST00000557041 GALMQ96C23 342 aa13.05□□□□□ -0.32
TMEM55B-207ENST00000557041 CLCC1Q96S66 551 aa13.05□□□□□ -0.32
TMEM55B-207ENST00000557041 LINC00470Q9BZP3 86 aa13.05□□□□□ -0.32
TMEM55B-207ENST00000557041 POMT1Q9Y6A1 747 aa13.05□□□□□ -0.32
TMEM55B-207ENST00000557041 ARFGEF3Q5TH69 2177 aa13.05□□□□□ -0.32
TMEM55B-207ENST00000557041 SPG11Q96JI7 2443 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 IGKV3D-15A0A087WSY6 115 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 FOXI3A8MTJ6 420 aaPredicted RBP13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 C9JQL5 133 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 HAND1O96004 215 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 FAM157CP0CG43 387 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 G6PCP35575 357 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 RPS10P46783 165 aaKnown RBP13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 KCNJ3P48549 501 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 DVL1P1P54792 670 aaPredicted RBP13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 PLPPR1Q8TBJ4 325 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 BCL2L2Q92843 193 aaPredicted RBP13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 SAT2Q96F10 170 aaPredicted RBP13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 PROCRQ9UNN8 238 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 H7C1Q1 480 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 AWAT1Q58HT5 328 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 PEAR1Q5VY43 1037 aaPredicted RBP13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 ZADH2Q8N4Q0 377 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 MUCL1Q96DR8 90 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 RBMXL1Q96E39 390 aaKnown RBP13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 ZNF71Q9NQZ8 489 aaPredicted RBP13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 UBE2L5PA0A1B0GUS4 154 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 CA11O75493 328 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 P2RY1P47900 373 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 ZNF718Q3SXZ3 478 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 Q3ZCU0 254 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 FAM201AQ5SY85 155 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 GPR146Q96CH1 333 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 GALNT14Q96FL9 552 aa13.04□□□□□ -0.32
TMEM55B-207ENST00000557041 ATMQ13315 3056 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 DCHS1Q96JQ0 3298 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 TRBV6-7A0A0A0MS04 114 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 IGKV1-6A0A0C4DH72 117 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 C1orf196B1AJZ1 125 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 UBE2KP61086 200 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 AVPI1Q5T686 147 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 LRRC29Q8WV35 223 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 GMPPAQ96IJ6 420 aaPredicted RBP13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 NCKAP5O14513 1909 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 hCG_1809904A0A1W2PP81 198 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 A0A1W2PR64 198 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 A0A1W2PRV1 198 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 CLEC18AA5D8T8 446 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 CRYBA1P05813 215 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 SRSF4Q08170 494 aaKnown RBP13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 FAM185AQ8N0U4 392 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 C9orf106Q8NAJ2 232 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 CLEC18CQ8NCF0 446 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 MRPL30Q8TCC3 161 aaKnown RBP13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 RSRP1Q9BUV0 290 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 DMXL2Q8TDJ6 3036 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 A0A1W2PPE2 198 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 TRIM77I1YAP6 450 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 ST8SIA5O15466 376 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 S100A9P06702 114 aaKnown RBP13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 SSTR5P35346 364 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 LEAP2Q969E1 77 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 RIMS4Q9H426 269 aaPredicted RBP13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 SMCO4Q9NRQ5 59 aa13.03□□□□□ -0.32
TMEM55B-207ENST00000557041 LRP5LA4QPB2 252 aa13.02□□□□□ -0.32
TMEM55B-207ENST00000557041 GLIPR1P48060 266 aa13.02□□□□□ -0.32
TMEM55B-207ENST00000557041 RAB5BP61020 215 aa13.02□□□□□ -0.32
TMEM55B-207ENST00000557041 Q6ZPA2 131 aa13.02□□□□□ -0.32
TMEM55B-207ENST00000557041 ZNF709Q8N972 641 aa13.02□□□□□ -0.32
TMEM55B-207ENST00000557041 ANAPC10Q9UM13 185 aa13.02□□□□□ -0.32
TMEM55B-207ENST00000557041 CEACAM18A8MTB9 384 aa13.02□□□□□ -0.33
TMEM55B-207ENST00000557041 SMPD2O60906 423 aa13.02□□□□□ -0.33
TMEM55B-207ENST00000557041 TAGLN2P37802 199 aaKnown RBP13.02□□□□□ -0.33
TMEM55B-207ENST00000557041 UBAC2Q8NBM4 344 aa13.02□□□□□ -0.33
TMEM55B-207ENST00000557041 ZFHX4Q86UP3 3567 aa13.02□□□□□ -0.33
TMEM55B-207ENST00000557041 A0A1W2PPH5 198 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 CDS2O95674 445 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 WT1P19544 449 aaPredicted RBP13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 BAXQ07812 192 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 BOD1Q96IK1 185 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 SEC11CQ9BY50 192 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 TUBD1Q9UJT1 453 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 MRPS18CQ9Y3D5 142 aaKnown RBP13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 KPTNQ9Y664 436 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 EXPH5Q8NEV8 1989 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 FGF16O43320 207 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 SPP1P10451 314 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 SELENOVP59797 346 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 CCL20P78556 96 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 SPSB4Q96A44 273 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 WASF3Q9UPY6 502 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 ADGRG4Q8IZF6 3080 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 A0A0G2JRQ6 117 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 C7orf77A4D0Y5 90 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 CRYAAP02489 173 aa13.01□□□□□ -0.33
TMEM55B-207ENST00000557041 OPN1MWP04001 364 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms