RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 CDK5R1Q15078 307 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 SMN1Q16637 294 aaKnown RBP7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 LDLRAD2Q5SZI1 272 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 CCBE1Q6UXH8 406 aaPredicted RBP7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 ASCL4Q6XD76 172 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 Q8N2B8 174 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 ABHD12Q8N2K0 398 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 ZNF565Q8N9K5 539 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 OR51T1Q8NGJ9 327 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 IL17DQ8TAD2 202 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 CREB3L1Q96BA8 519 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 BARHL1Q9BZE3 327 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 OR6C3Q9NZP0 311 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 DPM3Q9P2X0 92 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 DIMT1Q9UNQ2 313 aaKnown RBP7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 EXOSC1Q9Y3B2 195 aaKnown RBP7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 CMYA5Q8N3K9 4069 aa7.88□□□□□ -1.15
HNRNPC-228ENST00000557033 ODAMA1E959 279 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 ZNF729A6NN14 1252 aaPredicted RBP7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 HSPB6O14558 160 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 CHST1O43916 411 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 MMP23AO75900 390 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 MYL12AP19105 171 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 CDK2P24941 298 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 CD34P28906 385 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 BRS3P32247 399 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 GLIPR1P48060 266 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 ETV1P50549 477 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 ARHGDIBP52566 201 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 PRRX1P54821 245 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 DEFA6Q01524 100 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 BDH1Q02338 343 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 SLC34A1Q06495 639 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 SATL1Q86VE3 508 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 DHRSXQ8N5I4 330 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 OR4D6Q8NGJ1 314 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 NDNFQ8TB73 568 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 TMEM80Q96HE8 168 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 GPER1Q99527 375 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 PRSS22Q9GZN4 317 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 TMEM138Q9NPI0 162 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 SIGLEC9Q9Y336 463 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 HILPDAQ9Y5L2 63 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 HSPE1-MOB4S4R3N1 261 aa7.87□□□□□ -1.15
HNRNPC-228ENST00000557033 MEGF8Q7Z7M0 2845 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 MGAM2Q2M2H8 2515 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 KBTBD11-OT1A0A1B0GTJ5 212 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 SMIM30A4D0T7 59 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 LEUTXA8MZ59 168 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 H0YJX3 145 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 GABRPO00591 440 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 TOR1AO14656 332 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 KCNAB3O43448 404 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 GPX5O75715 221 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 IGLV1-47P01700 117 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 CGB3P0DN86 165 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 CGB7P0DN87 165 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 C21orf33P30042 268 aaPredicted RBP7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 CEACAM3P40198 252 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 PTGFRP43088 359 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 KCNJ3P48549 501 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 PPP3R1P63098 170 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 ADARB1P78563 741 aaKnown RBP7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 PAX5Q02548 391 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 RSU1Q15404 277 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 LRRC36Q1X8D7 754 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 OR2G6Q5TZ20 316 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 KCTD9Q7L273 389 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 C16orf82Q7Z2V1 217 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 KLHDC1Q8N7A1 406 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 OR4P4Q8NGL7 312 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 OR52N1Q8NH53 320 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 CNIH3Q8TBE1 160 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 TNFAIP8L1Q8WVP5 186 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 CYGBQ8WWM9 190 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 RGP1Q92546 391 aaPredicted RBP7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 TMEM106AQ96A25 262 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 SMIM19Q96E16 107 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 COQ2Q96H96 371 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 NKX3-1Q99801 234 aaPredicted RBP7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 METTL9Q9H1A3 318 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 LINC00574Q9H8X3 128 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 ZNF702PQ9H963 129 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 CHMP1AQ9HD42 196 aaPredicted RBP7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 PAK1IP1Q9NWT1 392 aaPredicted RBP7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 TAS2R4Q9NYW5 299 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 IL36GQ9NZH8 169 aa7.86□□□□□ -1.15
HNRNPC-228ENST00000557033 TET2Q6N021 2002 aaPredicted RBP7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 EFCAB10A6NFE3 127 aa7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 C5orf52A6NGY3 159 aa7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 OOSP1A8MZH6 123 aa7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 BUB1B-PAK6H3BSN5 160 aa7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 ZNF780AO75290 641 aaPredicted RBP7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 RGS11O94810 467 aa7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 CLIC3O95833 236 aa7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 BDKRB2P30411 391 aa7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 ZNF93P35789 620 aaPredicted RBP7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 EMX1Q04741 257 aaPredicted RBP7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 GPR176Q14439 515 aa7.85□□□□□ -1.15
HNRNPC-228ENST00000557033 ATXN7L3Q14CW9 347 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms