RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 COL4A6Q14031 1691 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 HELZP42694 1942 aaKnown RBP2.46□□□□□ -2.02
SLIRP-208ENST00000556956 DENND4CQ5VZ89 1909 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 SCN5AQ14524 2016 aa2.46□□□□□ -2.02
SLIRP-208ENST00000556956 DENND4AQ7Z401 1863 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 VWA8A3KMH1 1905 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ATG2AQ2TAZ0 1938 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 IGKV1D-8A0A087WSZ0 117 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 IGKV1-9A0A0C4DH69 117 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 KIR2DL5BA0A0G2JN68 375 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 KIR2DL5BA0A0G2JPC4 375 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 A0A1W2PP11 408 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 MED19A0JLT2 244 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 LRP5LA4QPB2 252 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 LIPT2A6NK58 231 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 VSTM2BA6NLU5 285 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ZFP92A6NM28 416 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 CEBPZOSA8MTT3 80 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 B4E171 279 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM250H0YL14 139 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ADAM20O43506 726 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 CHST1O43916 411 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 SSSCA1O60232 199 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF737O75373 536 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 TNFSF13O75888 250 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 DHRS3O75911 302 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 KBTBD11O94819 623 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 VENTXO95231 258 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 KLF8O95600 359 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 HRASP01112 189 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 IGLV3-1P01715 115 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 HLA-HP01893 362 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 TYMSP04818 313 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 CTXN2P0C2S0 81 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 OR4A8P0C604 315 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 MYF5P13349 255 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 HLA-DOBP13765 273 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 CTSEP14091 401 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 VDAC1P21796 283 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 HNRNPA2B1P22626 353 aaKnown RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 TUBG1P23258 451 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 OMGP23515 440 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 UCP1P25874 307 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 FKBP2P26885 142 aaKnown RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 NTSR1P30989 418 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 TSPAN7P41732 249 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 NPBWR2P48146 333 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ASCL1P50553 236 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 CNN1P51911 297 aaKnown RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 LBX1P52954 281 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 FBXW4P57775 412 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 TPPP2P59282 170 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 FXYD4P59646 89 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ERVS71-1P61550 626 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 HNRNPKP61978 463 aaKnown RBP eCLIP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 HBG1P69891 147 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 HBG2P69892 147 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 LCN2P80188 198 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 DEFB103AP81534 67 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 RPL19P84098 196 aaKnown RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 POU3F1Q03052 451 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 FMODQ06828 376 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 COTL1Q14019 142 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ENDOGQ14249 297 aaKnown RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 SHHQ15465 462 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ADIRFQ15847 76 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 EXT1Q16394 746 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ATP6V1FQ16864 119 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 BSXQ3C1V8 233 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 NKAIN1Q4KMZ8 207 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM41BQ5BJD5 291 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 SPIN3Q5JUX0 258 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ACTL10Q5JWF8 245 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 SAPCD1Q5SSQ6 148 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 COL5A1-AS1Q5SY13 56 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 WDR25Q64LD2 544 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF774Q6NX45 483 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF880Q6PDB4 577 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ASCL4Q6XD76 172 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 MEX3BQ6ZN04 569 aaKnown RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 CYP2G1PQ6ZSU1 146 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 P4HA3Q7Z4N8 544 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 C6orf201Q7Z4U5 140 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 CPEB2Q7Z5Q1 589 aaKnown RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 C5orf24Q7Z6I8 188 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 PRR22Q8IZ63 422 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 KIR2DL5AQ8N109 375 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM123Q8N131 208 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 GBGT1Q8N5D6 347 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 C12orf76Q8N812 135 aaPredicted RBP2.45□□□□□ -2.02
SLIRP-208ENST00000556956 GJC3Q8NFK1 279 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 OR5D18Q8NGL1 313 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 OR5L1Q8NGL2 311 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 OR5D13Q8NGL4 314 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 OR10S1Q8NGN2 331 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 CCL4L1Q8NHW4 92 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 DTD1Q8TEA8 209 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF721Q8TF20 911 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 NPRL2Q8WTW4 380 aa2.45□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM37Q8WXS4 190 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms